Protein Alignment spn-B and RAD51

DIOPT Version :10

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_011021.3
• Gene: RAD51 / 856831
• SGDID: S000000897
• Length: 400
• Species: Saccharomyces cerevisiae
• Alignment Length: 328
• Identity: 93/328 - (28%)
• Similarity: 142/328 - (43%)
• Gaps: 45/328 - (13%)

  Fly    24 PEEVLTTPKVRFLDT---RQQSLHT---IVRKCTPD--DVRVLKDAAA-KWLAEMPQSADSLFKP 79
            |.|.|....:...|.   |:..|||   :......|  :::.:.:|.| |.|.|..:.....|..
Yeast    82 PIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVPMGFVT 146

  Fly    80 LVNVRWSR-----VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGL 139
            ..:....|     ::.|...||...||||.|..||||.|....||:||...|::..|:|.::||
Yeast   147 AADFHMRRSELICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGG- 210

  Fly   140 GKG-VAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQ 203
            |:| ..||.||.:|...||:.:::.. ...|:..||   |:.......|:..|. :::...::|.
Yeast   211 GEGKCLYIDTEGTFRPVRLVSIAQRF-GLDPDDALN---NVAYARAYNADHQLR-LLDAAAQMMS 270

  Fly   204 QHGIGLIIIDSVAAIFRLYNDYLERAR------HMRRLADALLSYADKYNCAVVCVNQVATR-DG 261
            :....||::|||.|::|  .|:..|..      |:.:...||...||::..|||..|||..: ||
Yeast   271 ESRFSLIVVDSVMALYR--TDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVDG 333

  Fly   262 ------QDEIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEFLITA 320
                  ..:.|..|...||...|||...:     ..|.|    |..:::.||..|.....|.|..
Yeast   334 GMAFNPDPKKPIGGNIMAHSSTTRLGFKK-----GKGCQ----RLCKVVDSPCLPEAECVFAIYE 389

  Fly   321 EGV 323
            :||
Yeast   390 DGV 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	71/229 (31%)
RAD51	NP_011021.3	recomb_RAD51	83..397	CDD:274048	92/327 (28%)