Protein Alignment spn-B and RAD57

DIOPT Version :10

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_010287.1
• Gene: RAD57 / 851567
• SGDID: S000002411
• Length: 460
• Species: Saccharomyces cerevisiae
• Alignment Length: 249
• Identity: 75/249 - (30%)
• Similarity: 111/249 - (44%)
• Gaps: 60/249 - (24%)

  Fly    94 ALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTESSFPARRL- 157
            |:|...|||:.|.||||:.|.:..||:|||:||:|.|||....||||....||.||...|.:||
Yeast   106 AMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLPTQRLE 170

  Fly   158 --LQMSKACEKRHPEMELNFLG----NIFVENHIEAEPLLAC--------VIN-RIPRLMQQH-- 205
              |....|.||         ||    |||.         ::|        :|| ::|.|:::.
Yeast   171 SMLSSRPAYEK---------LGITQSNIFT---------VSCNDLINQEHIINVQLPILLERSKG 217

  Fly   206 GIGLIIIDSVAAIFRL------YNDYLERARHMRRLADALLSYADKYNCAVVCVNQVATRDGQDE 264
            .|.|:||||::...|:      :.:..|...::.|:|:.|...|..|:.:||..|||..:
Yeast   218 SIKLVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVVANQVGDK----- 277

  Fly   265 IPCLGLQWAHLGRTRLRVSRVPKQHRMG------DQLITVRKLEILYSPETPND 312
             |......||      |.......:::|      :..|..|::..|....:.||
Yeast   278 -PLANSPVAH------RTYVTDYDYQLGWLVGWKNSTILYRQMNSLLGASSNND 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	72/245 (29%)
RAD57	NP_010287.1	XRCC3	107..445	CDD:410899	74/248 (30%)