Protein Alignment spn-B and RAD51C

DIOPT Version :10

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001189749.1
• Gene: RAD51C / 819136
• AraportID: AT2G45280
• Length: 387
• Species: Arabidopsis thaliana
• Alignment Length: 341
• Identity: 99/341 - (29%)
• Similarity: 166/341 - (48%)
• Gaps: 57/341 - (16%)

  Fly    22 LAPEEVLTTPKVRFLDT--RQQSLHTIVRKCTPDDVRVLKDAAAKWLAEMPQSADSLFKPLVN-- 82
            ||..:.|..|.:|.|::  |...:.|       |:..:.::.|.:.|....||..:..:.|:|
plant    56 LARGKFLLYPNLRRLESVARFSLIST-------DNANITEEEAFEILKLANQSCCNGSRSLINGA 113

  Fly    83 -VRWS---------RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELG 137
             ..|.         |::..||.||...|||:..|.:||:.|..|:||||:.:|||:.||:|||.|
plant   114 KNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECG 178

  Fly   138 GLGKGVAYICTESSFPARRLLQMSKACEKRHPEME--LNFLGNIFVENHIEAEP---------LL 191
            |||....||.||.||...|.||:::||.:   :||  ..::...|..|.::.:|         ..
plant   179 GLGGKAIYIDTEGSFMVERALQIAEACVE---DMEEYTGYMHKHFQANQVQMKPEDILENIFYFR 240

  Fly   192 AC-------VINRIPRLMQQH-GIGLIIIDSVAAIFRL-YNDYLERARHMRRLADALLSYADKYN 247
            .|       ::|.:.:.:.:: .:.::|:||:...||. |:|..:|.|.:..:|...:..|.|::
plant   241 VCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFS 305

  Fly   248 CAVVCVNQVATR--DGQDEIP-CLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPET 309
            .|||.:|||.|:  :|..::. .||..|:|....|:.:      :..||:    |...|..||..
plant   306 LAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL------YWNGDE----RYAYIDKSPSL 360

  Fly   310 PNDFAEFLITAEGVVN 325
            |:..|.:.:|:.|:.|
plant   361 PSASASYTVTSRGLRN 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	75/238 (32%)
RAD51C	NP_001189749.1	radA	27..>314	CDD:235273	79/267 (30%)
		Rad51C	147..356	CDD:410900	68/221 (31%)