Protein Alignment spn-B and RAD51

DIOPT Version :9

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001157741.1
• Gene: RAD51 / 5888
• HGNCID: 9817
• Length: 340
• Species: Homo sapiens
• Alignment Length: 296
• Identity: 88/296 - (29%)
• Similarity: 131/296 - (44%)
• Gaps: 48/296 - (16%)

  Fly    54 DVRVLKDAAA-KWLAEMPQSA----DSLFKPLVNVRWSRVSFGCSALDRCTG--GGVVTRGITEL 111
            :::.:.:|.| |.|.|....|    :|:......:|.|..|...::..|..|  ||:.|..|||:
Human    62 NIKGISEAKADKILTESRSVARLECNSVILVYCTLRLSGSSDSPASASRVVGTTGGIETGSITEM 126

  Fly   112 CGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVA-YICTESSFPARRLLQMSKACEKRHPEMELNF 175
            .|....||||:...|::..|||.:.|| |:|.| ||.||.:|...|||    |..:|:.....:.
Human   127 FGEFRTGKTQICHTLAVTCQLPIDRGG-GEGKAMYIDTEGTFRPERLL----AVAERYGLSGSDV 186

  Fly   176 LGNI-----FVENHIEAEPLLACVINRIPRLMQQHGIGLIIIDSVAAIFRLYNDYLERAR----- 230
            |.|:     |..:|      ...::.:...:|.:....|:|:||..|::|  .||..|..
Human   187 LDNVAYARAFNTDH------QTQLLYQASAMMVESRYALLIVDSATALYR--TDYSGRGELSARQ 243

  Fly   231 -HMRRLADALLSYADKYNCAVVCVNQVATR-DG------QDEIPCLGLQWAHLGRTRLRVSRVPK 287
             |:.|....||..||::..|||..|||..: ||      ..:.|..|...||...|||.:.:...
Human   244 MHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRG 308

  Fly   288 QHRMGDQLITVRKLEILYSPETPNDFAEFLITAEGV 323
            :.|:         .:|..||..|...|.|.|.|:||
Human   309 ETRI---------CKIYDSPCLPEAEAMFAINADGV 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	Rad51	87..323	CDD:285604	77/256 (30%)
		Rad51_DMC1_radA	88..324	CDD:238543	79/257 (31%)
RAD51	NP_001157741.1	recomb_RAD51	25..340	CDD:274048	88/296 (30%)
		HHH_5	32..77	CDD:291205	4/14 (29%)
		Rad51_DMC1_radA	116..336	CDD:238543	76/242 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.810