Sequence 1: | NP_476740.1 | Gene: | spn-B / 41746 | FlyBaseID: | FBgn0003480 | Length: | 341 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038942551.1 | Gene: | Rad51c / 497976 | RGDID: | 1563765 | Length: | 402 | Species: | Rattus norvegicus |
Alignment Length: | 338 | Identity: | 99/338 - (29%) |
---|---|---|---|
Similarity: | 147/338 - (43%) | Gaps: | 66/338 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 EIAEQVNVLAPEEVLTTPKVRFLDTRQQSLHTIVRKCTPDDVRVL------KDAAAKWLAEMPQS 72
Fly 73 ADSLFKPLVNVRWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELG 137
Fly 138 GLGKGVAYICTESSFPARRLLQMSKACEKR-------HPEMEL----------NFLGNIFVENHI 185
Fly 186 EAEPLLACVINRIPRLMQQHG-IGLIIIDSVAAIFRL-YNDYLERARHMRRLADALLSYADKYNC 248
Fly 249 AVVCVNQVATRDGQDE---IPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILY-SPET 309
Fly 310 PNDFAEFLITAEG 322 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spn-B | NP_476740.1 | Rad51 | 87..323 | CDD:285604 | 85/259 (33%) |
Rad51_DMC1_radA | 88..324 | CDD:238543 | 85/258 (33%) | ||
Rad51c | XP_038942551.1 | Sms | 97..>166 | CDD:223993 | 26/80 (33%) |
Rad51C | 145..357 | CDD:410900 | 70/223 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0468 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |