Protein Alignment spn-B and rad51c

DIOPT Version :9

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001006101.1
• Gene: rad51c / 450081
• ZFINID: ZDB-GENE-041010-204
• Length: 362
• Species: Danio rerio
• Alignment Length: 278
• Identity: 99/278 - (35%)
• Similarity: 140/278 - (50%)
• Gaps: 40/278 - (14%)

  Fly    86 SRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTES 150
            |.|:| ||.||...||||.....||:|||.|||||||.:||::.||:|...||||....||.||.
Zfish    85 SIVTF-CSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQIPVFFGGLGGKALYIDTEG 148

  Fly   151 SFPARRLLQMSKAC-----------EKRHPEMELN---FLGNIFVENHIEAEPLLACVINRIPRL 201
            ||..:|:..|::|.           |::....|||   .|.|:|:....:...||| .:..:|..
Zfish   149 SFLVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKILSNLFLVRCHDYVKLLA-EVYLLPDF 212

  Fly   202 MQQH-GIGLIIIDSVAAIFRL-YNDYLERARHMRRLADALLSYADKYNCAVVCVNQVATR--DGQ 262
            :.:| .:.|::|||:|..||. :.|..:|.|.:..||..|:..|.::..|||..||:.||  :||
Zfish   213 LSEHPEVRLVVIDSIAFPFRHDFEDLSQRTRLLNGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQ 277

  Fly   263 DE-IPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILY-SPETPNDFAEFLITAEGVVN 325
            .: :|.||..|.|....||.:      |..|.     |:|..|| ||.......::.||.:|..:
Zfish   278 SKLVPALGESWGHAATQRLIL------HWEGQ-----RRLASLYKSPSQMEATVQYQITVQGFRD 331

  Fly   326 VP-------EPSVPSPPA 336
            .|       :||..|.|:
Zfish   332 SPDEPRPTFDPSEVSSPS 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	Rad51	87..323	CDD:285604	92/255 (36%)
		Rad51_DMC1_radA	88..324	CDD:238543	93/255 (36%)
rad51c	NP_001006101.1	radA	3..331	CDD:235273	94/258 (36%)
		Rad51_DMC1_radA	86..330	CDD:238543	93/256 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1065
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.940