Sequence 1: | NP_476740.1 | Gene: | spn-B / 41746 | FlyBaseID: | FBgn0003480 | Length: | 341 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001124039.1 | Gene: | Dmc1 / 362960 | RGDID: | 1307611 | Length: | 340 | Species: | Rattus norvegicus |
Alignment Length: | 345 | Identity: | 87/345 - (25%) |
---|---|---|---|
Similarity: | 151/345 - (43%) | Gaps: | 49/345 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LDQLPKHIREIAEQVNVLAPEEVLTTPKVRFLDTRQQSLHTIVRKCTPDDVRVLKDAAAKWLAEM 69
Fly 70 PQSADSLFKP--LVNVRWS-------RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQ 125
Fly 126 LSLCVQLPRELGGLGKGVAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPL 190
Fly 191 LACVINRIPRLMQQHGI-GLIIIDSVAAIFRL----YNDYLERARHMRRLADALLSYADKYNCAV 250
Fly 251 VCVNQVATRDG-------QDEIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPE 308
Fly 309 TPNDFAEFLITAEGVVNVPE 328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spn-B | NP_476740.1 | Rad51 | 87..323 | CDD:285604 | 67/247 (27%) |
Rad51_DMC1_radA | 88..324 | CDD:238543 | 68/247 (28%) | ||
Dmc1 | NP_001124039.1 | recomb_DMC1 | 24..338 | CDD:131292 | 86/341 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0468 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |