Protein Alignment spn-B and rad57

DIOPT Version :10

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_593627.1
• Gene: rad57 / 2542007
• PomBaseID: SPAC20H4.07
• Length: 354
• Species: Schizosaccharomyces pombe
• Alignment Length: 312
• Identity: 84/312 - (26%)
• Similarity: 139/312 - (44%)
• Gaps: 62/312 - (19%)

  Fly    67 AEMPQSADSLFKPLVNVRWSR-------VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLL 124
            :|:.|..:.:...|..||.|.       ::.|...||....||:....:||:||.:|.||:|..:
pombe    47 SELLQLIEQISLLLQPVRCSASKVTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCM 111

  Fly   125 QLSLCVQLPRELGGLGKGVAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEP 189
            ||.|.||||..|||:.|...:|.|||....:||.::::...:|:|:.:..   :|.::|..:...
pombe   112 QLCLMVQLPLSLGGMNKAAVFISTESGLETKRLFELARYLPERYPKADKK---DIIIKNPGDRVY 173

  Fly   190 LLAC---------VINRIPRLMQQHGIGLIIIDSVAAIFRL---YN----------DYLERARHM 232
            .:.|         :..::|.|..:..|||:|:||||:.:|.   ||          :..:|...:
pombe   174 TILCPDLESQEHIIQYQLPILFNRDKIGLVILDSVASNYRAELRYNRSKSHFRDLDNIAKRGNQL 238

  Fly   233 RRLADALLSYADKYNCAVVCVNQVATR--------------------------DGQDEIPCLGLQ 271
            .:||..|.:.|.::..|||..|||:.|                          |...:||.|||.
pombe   239 GKLAMTLRTLAHQHEAAVVIANQVSDRIPRDYDAIGLFSLDYQSQWFSGWDDTDPNPKIPSLGLV 303

  Fly   272 WAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEFLITAEGV 323
            |.:...|||.:  :.|.....:.  :.|...::|||.:|.......|.:.|:
pombe   304 WTNNISTRLAL--IKKTDSATNN--SGRIFRVVYSPNSPRLDVRICIGSVGI 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	74/263 (28%)
rad57	NP_593627.1	Rad51	22..354	CDD:462471	84/312 (27%)