Sequence 1: | NP_476740.1 | Gene: | spn-B / 41746 | FlyBaseID: | FBgn0003480 | Length: | 341 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035364.1 | Gene: | Rad51 / 19361 | MGIID: | 97890 | Length: | 339 | Species: | Mus musculus |
Alignment Length: | 256 | Identity: | 79/256 - (30%) |
---|---|---|---|
Similarity: | 116/256 - (45%) | Gaps: | 41/256 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVA-YICTES 150
Fly 151 SFPARRLLQMSKACEKRHPEMELNFLGNI-----FVENHIEAEPLLACVINRIPRLMQQHGIGLI 210
Fly 211 IIDSVAAIFRLYNDYLERAR------HMRRLADALLSYADKYNCAVVCVNQVATR-DG------Q 262
Fly 263 DEIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEFLITAEGV 323 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spn-B | NP_476740.1 | Rad51 | 87..323 | CDD:285604 | 77/254 (30%) |
Rad51_DMC1_radA | 88..324 | CDD:238543 | 79/255 (31%) | ||
Rad51 | NP_035364.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..22 | ||
recomb_RAD51 | 25..339 | CDD:274048 | 79/256 (31%) | ||
Interaction with PALB2. /evidence=ECO:0000250 | 184..257 | 18/80 (23%) | |||
Nuclear export signal, masked by the interaction with BRCA2. /evidence=ECO:0000250|UniProtKB:Q06609 | 245..260 | 5/14 (36%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0468 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |