Protein Alignment spn-B and rad-51

DIOPT Version :10

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001023465.1
• Gene: rad-51 / 177914
• WormBaseID: WBGene00004297
• Length: 395
• Species: Caenorhabditis elegans
• Alignment Length: 359
• Identity: 94/359 - (26%)
• Similarity: 153/359 - (42%)
• Gaps: 72/359 - (20%)

  Fly    23 APEEVLTTPKVRFLDTRQQSLHTIVRK-----CTPDDVRVLKDAA-----------------AKW 65
            |.::.|....:......|....|::.|     .:..|:..||:|.                 .|.
 Worm    55 AADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKG 119

  Fly    66 LAEMPQSADSLFKPL-------------VNVRWS---RVSFGCSALDRCTGGGVVTRGITELCGA 114
            :::  |.|:.:.|..             |:|:.|   ::..|.::|||..|||:.|..|||:.|.
 Worm   120 ISD--QKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGE 182

  Fly   115 AGVGKTQLLLQLSLCVQLPRELGGLGKG-VAYICTESSFPARRLLQMSKACEKRHPEMELNFLGN 178
            ...|||||...|::..|||.::|| |:| ..||.|.::|...|::    |..:|:.....:.|.|
 Worm   183 YRTGKTQLCHSLAVLCQLPIDMGG-GEGKCMYIDTNATFRPERII----AIAQRYNMDSAHVLEN 242

  Fly   179 IFVENHIEAEPLLACVINRIPRLMQQHGIGLIIIDSVAAIFRLYNDY------LERARHMRRLAD 237
            |.|.....:|.|:|.:| |...:|.:....::|:|...|.||  |:|      .||...:.....
 Worm   243 IAVARAYNSEHLMALII-RAGAMMSESRYAVVIVDCATAHFR--NEYTGRGDLAERQMKLSAFLK 304

  Fly   238 ALLSYADKYNCAVVCVNQVATR-DGQDEI-------PCLGLQWAHLGRTRLRVSRVPKQHRMGDQ 294
            .|...||:|..||:..|||..: ||...:       |..|...||:..|||.:.:...::|:.
 Worm   305 CLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVA-- 367

  Fly   295 LITVRKLEILYSPETPNDFAEFLITAEGVVNVPE 328
                   :::.||..|...|.:.||..|:.:..|
 Worm   368 -------KMVQSPNLPEAEATYSITNHGIEDARE 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	71/230 (31%)
rad-51	NP_001023465.1	PTZ00035	62..394	CDD:185407	91/350 (26%)