DRSC/TRiP Functional Genomics Resources

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Protein Alignment spn-B and LOC11175888

DIOPT Version :10

Sequence 1:NP_476740.1 Gene:spn-B / 41746 FlyBaseID:FBgn0003480 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_061503323.1 Gene:LOC11175888 / 11175888 VectorBaseID:AGAMI1_001804 Length:270 Species:Anopheles gambiae


Alignment Length:256 Identity:96/256 - (37%)
Similarity:136/256 - (53%) Gaps:29/256 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQ--LPRELGGLGKGVAYI 146
            ||.:||||....||.||||:..|||.||.|..|.||||:.|:|:|..|  :|...      |.||
Mosquito    21 RWRKVSFGVPVFDRLTGGGIGARGIFELAGDPGSGKTQIALKLALTAQRTVPNSC------VVYI 79

  Fly   147 CTESSFPARRLLQMSKACEKRHPE-----MELNFLGNIFVENHIEAEP-LLACVINRIPRLMQQH 205
            |||..||:|||||| :|..||...     .:.||:.:|.|| |:...| |:||:.:|:|:|::..
Mosquito    80 CTEHRFPSRRLLQM-EAEYKRQQSGDDAVRDHNFVDHILVE-HVWCVPTLMACLFDRLPKLLEST 142

  Fly   206 GIGLIIIDSVAAIFRLYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV------ATRDGQDE 264
            .|.::||||:|:.|....||:.||...|.:...|....:::|.|:...|||      :|.|.|..
Mosquito   143 KISVLIIDSIASPFVEERDYISRAETFRSIVHRLHQLQERHNFAICVTNQVRSVIDSSTLDDQRN 207

  Fly   265 IPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEFLITAEGVVN 325
            :|.|||.|:.|..|||::||.....       ..|:..:::.|..|.....:.|...|.|:
Mosquito   208 VPALGLAWSTLVHTRLQLSRTTLSS-------NDRRCTVVFGPSAPTTHGFYQIDESGPVD 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spn-BNP_476740.1 XRCC3 95..311 CDD:410899 86/229 (38%)
LOC11175888XP_061503323.1 None

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