DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set8 and suv39h2

DIOPT Version :10

Sequence 1:NP_650354.1 Gene:Set8 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001016508.1 Gene:suv39h2 / 549262 XenbaseID:XB-GENE-852675 Length:406 Species:Xenopus tropicalis


Alignment Length:129 Identity:43/129 - (33%)
Similarity:70/129 - (54%) Gaps:12/129 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   564 GKGRGVVADRPFKRNEFVVEYVGDLISIGEAAEREKRYALDENAGCYMYYFKHKSQQYCIDATVD 628
            |:|.||...:..|:|.||:||||::|:..||..|.::|  |.....|::...:::.::.:|| ..
 Frog   256 GRGWGVKTLQKIKKNSFVMEYVGEVITSEEAERRGQQY--DSRGITYLFDLDYEADEFTVDA-AR 317

  Fly   629 TGKLGRLINHSRAGNLMTKVVLIK----QRPHLVLLAKDDIEPGEELTYDY-----GDRSKESL 683
            .|.:...:|||...||....|.|.    :.|.:.|.:..:|:.|||||:||     ||.|.:|:
 Frog   318 YGNVSHFVNHSCDPNLQVFNVFIDNLDVRLPRIALFSTRNIKAGEELTFDYQMKGSGDFSTDSI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set8NP_650354.1 SET_SETD8 539..678 CDD:380926 40/122 (33%)
suv39h2NP_001016508.1 CD_SUV39H1_like 43..91 CDD:349289
SET_SUV39H2 163..405 CDD:380930 43/129 (33%)
Blue background indicates that the domain is not in the aligned region.

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