DRSC/TRiP Functional Genomics Resources

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Protein Alignment PR-Set7 and set-1

DIOPT Version :9

Sequence 1:NP_001247100.1 Gene:PR-Set7 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001022796.1 Gene:set-1 / 175918 WormBaseID:WBGene00004781 Length:242 Species:Caenorhabditis elegans


Alignment Length:240 Identity:91/240 - (37%)
Similarity:135/240 - (56%) Gaps:19/240 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   454 EDDVRALIKAAEERENQNKAPATANSNKAGMKTMLKPAPVKSKTKSKGPTKGQPPLPLAATNGNR 518
            :|...|...:::...::|.:...::|:.:|..|     |.|:....||.:        .....|.
 Worm    15 KDRAAAASPSSDIENSENPSSLASHSSSSGRMT-----PSKNTRSRKGVS--------VKDVSNH 66

  Fly   519 EMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLE---ERCDGLQVRHFMGKGRGVVADRPFKRNEF 580
            ::|:||.||||.|||...:.:|....|...||:   ||.  |:|...:.||||:.....|::.:|
 Worm    67 KITEFFQVRRSNRKTSKQISDEAKHALRDTVLKGTNERL--LEVYKDVVKGRGIRTKVNFEKGDF 129

  Fly   581 VVEYVGDLISIGEAAEREKRYALDENAGCYMYYFKHKSQQYCIDATVDTGKLGRLINHS-RAGNL 644
            ||||.|.::...||...|::|:.||..|.|||:|:|.::::|||||.::...||||||| ...||
 Worm   130 VVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHNNKKWCIDATKESPWKGRLINHSVLRPNL 194

  Fly   645 MTKVVLIKQRPHLVLLAKDDIEPGEELTYDYGDRSKESLLHHPWL 689
            .||||.|....||:|:|:..|..||||.|||||||.|::..:|||
 Worm   195 KTKVVEIDGSHHLILVARRQIAQGEELLYDYGDRSAETIAKNPWL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PR-Set7NP_001247100.1 SET 566..676 CDD:279228 52/110 (47%)
set-1NP_001022796.1 SET 104..232 CDD:214614 61/129 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159537
Domainoid 1 1.000 104 1.000 Domainoid score I4220
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003682
OrthoInspector 1 1.000 - - oto20239
orthoMCL 1 0.900 - - OOG6_105827
Panther 1 1.100 - - LDO PTHR46167
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3045
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.840

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