DRSC/TRiP Functional Genomics Resources

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Protein Alignment PR-Set7 and RGD1561318

DIOPT Version :9

Sequence 1:NP_001247100.1 Gene:PR-Set7 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_017457840.1 Gene:RGD1561318 / 100361623 RGDID:1561318 Length:361 Species:Rattus norvegicus


Alignment Length:387 Identity:132/387 - (34%)
Similarity:187/387 - (48%) Gaps:88/387 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 GQPRRR-KPATPHRILCPSPIKTALKVTG------------------GICKVGSADPLSPRKSPR 394
            |.|||| .|....:...|.|.::..||.|                  .||.|.|.:..|..:|| 
  Rat    15 GAPRRRWWPQRQRQRWWPDPGESKGKVAGRAAMSLVGLWENLFAGQSKICAVMSPNKWSGIRSP- 78

  Fly   395 KLPTTTAAVAACKSRRRLNQPK-PQAPYQPQLQKPPSQQQQQQQDDIVVVLDDDDDEGDDEDDVR 458
             |....:.|.        ::.| |..|....|:|                       |:::.:.|
  Rat    79 -LQEENSVVH--------HEVKFPGKPLAGILRK-----------------------GEEKRNAR 111

  Fly   459 ALIKAAEERENQNKAPATANSNKAGMKTMLKPAPVKSKTKSKGPTKGQPP--------------- 508
            .:|::..:.:.| |:..|....:|       |.| ..|.::|.|.|..||               
  Rat   112 NVIRSTVKSDEQ-KSKGTRRGPRA-------PFP-NQKPEAKAPPKAPPPSRDYTNVAVAKQAQK 167

  Fly   509 LPL-----------AATNGNREMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLEERCDGLQVRHF 562
            .||           ..|..||::|||.|||||.||:|..::.|..:.:::.:...:.:|::|...
  Rat   168 KPLKGKQAPREKSQGKTQQNRKLTDFHPVRRSSRKSKAELRSEERKKIDELIESGKEEGMKVDLI 232

  Fly   563 MGKGRGVVADRPFKRNEFVVEYVGDLISIGEAAEREKRYALDENAGCYMYYFKHKSQQYCIDATV 627
            .||||||:|.:.|.|.:|||||.||||.|.:|.:||..||.:.:.|||||||::..:.||:|||.
  Rat   233 DGKGRGVIATKRFSRGDFVVEYHGDLIEITDAKKREALYAQNPSTGCYMYYFQYLRKTYCVDATQ 297

  Fly   628 DTGKLGRLINHSRAGNLMTKVVLIKQRPHLVLLAKDDIEPGEELTYDYGDRSKESLLHHPWL 689
            :|.:||||||||:.||..||:..|...|||:|:|..||..||||.||||||||.|:..:|||
  Rat   298 ETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLYDYGDRSKASIEAYPWL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PR-Set7NP_001247100.1 SET 566..676 CDD:279228 61/109 (56%)
RGD1561318XP_017457840.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341331
Domainoid 1 1.000 138 1.000 Domainoid score I4709
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003682
OrthoInspector 1 1.000 - - otm46306
orthoMCL 1 0.900 - - OOG6_105827
Panther 1 1.100 - - O PTHR46167
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3045
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.840

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