DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PR-Set7 and si:dkey-23a23.2

DIOPT Version :9

Sequence 1:NP_001247100.1 Gene:PR-Set7 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_017210951.2 Gene:si:dkey-23a23.2 / 100034534 ZFINID:ZDB-GENE-060503-158 Length:596 Species:Danio rerio


Alignment Length:611 Identity:138/611 - (22%)
Similarity:215/611 - (35%) Gaps:205/611 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 ELLFDGSSRAS------------SNSPFYQHDMDVMQEIQQTPEIPHIKKVTEPLEGLGSLADFQ 234
            ::|.|.|||.:            .|.| .:.:.||:.:..: ||...:.:.|||.:..       
Zfish    69 QILPDRSSRTNMVKELLQRGFFIKNQP-TEPETDVVSQSTE-PETAVVSQPTEPEKAT------- 124

  Fly   235 THRSALRDSHSSTHSSSTDNI----FLQEPVLTLDIDRTPTK--ASSIKINRSFELAGAV--FSS 291
              .||:.||.:...::..:.:    .||..:..|..::...:  ..:|.|:..|:..|||  |:.
Zfish   125 --MSAIPDSAAILRAAKPEFLRVCMKLQNNIEVLSSEKVLFRYYCEAILIHHYFQSPGAVQAFTD 187

  Fly   292 PPSVLNACLNGRFNQIVSLNGQKE--ALDLPH---FDL-------DQHDSSSCDSGVACGLTANT 344
            ...|......||.  :..::.||.  ||.|..   |.|       :......|.:......:...
Zfish   188 SEWVDRLHHGGRV--VTGVHSQKAMFALTLQEEVWFQLYFVQIRPENIRPEKCCNQFFLNSSGEA 250

  Fly   345 ESPAGQPRRRKPATPHRILCPSPIKTALKVTGGICKVGSADPL--SPRKSPRKLPT----TTAAV 403
            .|...|..||             :....|:     .:||:..:  :.|.|.:.|||    .....
Zfish   251 LSNVAQDMRR-------------LHDMFKL-----PLGSSQFMRKTLRISAKNLPTHQRDAITLY 297

  Fly   404 AACKS------RRRLNQPKPQAPYQPQLQKPPSQQQQQQQDDIVVVLDDDDDEG-DDEDDVRALI 461
            .||.|      .|||                    |.||..|..|:|  |...| ..||:.||:.
Zfish   298 LACSSGDPHQTHRRL--------------------QPQQVVDTAVLL--DSLVGFSIEDESRAVA 340

  Fly   462 KAAEERENQNKAPATANSNKAGMKTMLKPAPVK--SKTKSKGPTK--GQPPLPLAATN-GNREMT 521
            :.:||.|                       |||  |...|..|..  ||||..:...| |..:..
Zfish   341 ETSEEIE-----------------------PVKDFSSFISSFPVSRGGQPPTKMQRLNAGFPDDR 382

  Fly   522 DFFPVRRSVRKTK--------------TAV-----------------KEE----WMRGLE----- 546
            .|:...|:|:..:              |||                 .||    |...|:     
Zfish   383 VFYDKWRTVQYNQRQEYLLSQFTQSKPTAVTVAKVIGQEGWKGNHPKPEEIVSLWKPALKVTIEK 447

  Fly   547 -----QAVLEERCDGLQVRHFMG--KGRGVVADRPFKRNEFVVEYVGDLISIGEAAEREKRYALD 604
                 ::|.::...||.::.| |  :|:||||.:.|.:.:.|.:|.|.:||  ..:.|:....:.
Zfish   448 DEIIIKSVSQQSWSGLAIKDF-GPVRGQGVVATKRFSKGDIVCDYHGKVIS--GTSGRQIMEDIR 509

  Fly   605 ENAGCYMYYFKHKSQQYCIDATV-------DTGKLGRLINH-SRAGNLM------------TKVV 649
            :.:| |:::||...:.:||||..       |....||.||| |:..||.            |.||
Zfish   510 DKSG-YLFFFKAGQRDFCIDARTFPCECHPDKVSFGRKINHSSKMANLKLVHCVMKINGKDTDVV 573

  Fly   650 LIKQRPHLVLLAKDDIEPGEELTYDY 675
            |.|        |..||:....|.:|:
Zfish   574 LFK--------ALQDIDVNTHLKFDH 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PR-Set7NP_001247100.1 SET 566..676 CDD:279228 39/130 (30%)
si:dkey-23a23.2XP_017210951.2 SET 468..590 CDD:214614 40/133 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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