DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set8 and nsd2

DIOPT Version :10

Sequence 1:NP_650354.1 Gene:Set8 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001076020.1 Gene:nsd2 / 100000709 ZFINID:ZDB-GENE-030131-2581 Length:1461 Species:Danio rerio


Alignment Length:172 Identity:49/172 - (28%)
Similarity:65/172 - (37%) Gaps:43/172 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 ERCDG----------LQVRHFMGKGRGVVADRPFKRNEFVVEYVGDLISIGEAAEREKRYALDEN 606
            |||..          .::....|||.|:::.|..|:.|||.||||:||...|...| .|:| .||
Zfish  1141 ERCQNQDFTKRLYPETKIIRTAGKGWGLISLRDIKKGEFVNEYVGELIDEEECRSR-IRHA-QEN 1203

  Fly   607 AGCYMYYFKHKSQQYCIDATVDTGKLG---RLINHSRAGNLMTKVVLIKQRPHLVLLAKDDIEPG 668
            ...:.|......     |..:|.|..|   |.:|||...|..|:...:.....:.|.|..||..|
Zfish  1204 DITHFYMLTIDK-----DRIIDAGPKGNYSRFMNHSCQPNCETQKWTVNGDTRVGLFAVCDIPAG 1263

  Fly   669 EELTYDY-----------------------GDRSKESLLHHP 687
            .|||::|                       |||.|......|
Zfish  1264 TELTFNYNLDCLGNEKTVCRCGAPNCSGFLGDRPKNGHTSEP 1305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set8NP_650354.1 SET_SETD8 539..678 CDD:380926 45/161 (28%)
nsd2NP_001076020.1 PWWP_NSD_rpt1 285..393 CDD:438972
ASY3-like <675..>751 CDD:466584
PHD_SF 761..803 CDD:473978
PHD_SF 808..854 CDD:473978
PHD_SF 855..908 CDD:473978
PHD4_NSD2 925..965 CDD:277127
PWWP_NSD2_rpt2 971..1065 CDD:438993
AWS 1116..1151 CDD:465559 3/9 (33%)
SET_NSD2 1153..1294 CDD:380988 41/147 (28%)
PHD_SF 1329..1371 CDD:473978
C5HCH 1370..1415 CDD:465605
Blue background indicates that the domain is not in the aligned region.

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