Protein Alignment Polr2I and RPA12

DIOPT Version :10

• Sequence 1: NP_731898.1
• Gene: Polr2I / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: NP_012597.1
• Gene: RPA12 / 853526
• SGDID: S000003824
• Length: 125
• Species: Saccharomyces cerevisiae
• Alignment Length: 127
• Identity: 28/127 - (22%)
• Similarity: 48/127 - (37%)
• Gaps: 33/127 - (25%)

  Fly    20 FCQECNNMLYPKEDKENKIL--LYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV------ 76
            ||.:|.::|    :..|.:|  ...|..|        ..||.......:..:|....|.
Yeast     9 FCLDCGDLL----ENPNAVLGSNVECSQC--------KAIYPKSQFSNLKVVTTTADDAFPSSLR 61

  Fly    77 ----ISDPTLPRTE--DHA-----CPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
                :...:|.:.|  |.|     ||:|.:.|..:...|.|.|:|...::|.||  :|.:::
Yeast    62 AKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCT--SCGYKF 121

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2I	NP_731898.1	RPB9	19..129	CDD:441202	28/127 (22%)
		Zn-ribbon_RPB9	78..128	CDD:259793	16/57 (28%)
RPA12	NP_012597.1	RPB9	9..122	CDD:441202	28/127 (22%)
		Zn-ribbon_RPA12	78..124	CDD:259792	14/46 (30%)