Protein Alignment Polr2I and AT4G07950

DIOPT Version :10

• Sequence 1: NP_731898.1
• Gene: Polr2I / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: NP_192535.1
• Gene: AT4G07950 / 826299
• AraportID: AT4G07950
• Length: 106
• Species: Arabidopsis thaliana
• Alignment Length: 120
• Identity: 34/120 - (28%)
• Similarity: 46/120 - (38%)
• Gaps: 23/120 - (19%)

  Fly    18 IRFCQECNNMLYPKEDKENKILLYACRNCDY------KQEADSNCIYVNKIMHEIDELTHIVPDV 76
            :.||..|.|:|..:....::   :.|..|.|      :.|.....:.|.|         .|.|.|
plant     1 MEFCPTCGNLLRYEGGGSSR---FFCSTCPYVANIERRVEIKKKQLLVKK---------SIEPVV 53

  Fly    77 ISD--PTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
            ..|  ||...|| ..||:|.|.:|.|...|.|.|:|....:|.|.  .|...|.|
plant    54 TKDDIPTAAETE-APCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWRE 105

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2I	NP_731898.1	RPB9	19..129	CDD:441202	33/117 (28%)
		Zn-ribbon_RPB9	78..128	CDD:259793	18/51 (35%)
AT4G07950	NP_192535.1	RPB9	2..105	CDD:441202	33/117 (28%)