Protein Alignment Polr2I and Polr2i

DIOPT Version :10

• Sequence 1: NP_731898.1
• Gene: Polr2I / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: NP_081535.1
• Gene: Polr2i / 69920
• MGIID: 1917170
• Length: 125
• Species: Mus musculus
• Alignment Length: 120
• Identity: 93/120 - (77%)
• Similarity: 104/120 - (86%)
• Gaps: 0/120 - (0%)

  Fly    10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVP 74
            |..||||||||||||||||||||||||:|||||||||||:||||::|||||||.||:||||.|:.
Mouse     6 TYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIA 70

  Fly    75 DVISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
            ||..||||||||||.|.||.|:||||||:.:.|||:.||||||||..:|.|||||
Mouse    71 DVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2I	NP_731898.1	RPB9	19..129	CDD:441202	84/109 (77%)
		Zn-ribbon_RPB9	78..128	CDD:259793	34/49 (69%)
Polr2i	NP_081535.1	RPOL9	15..68	CDD:197822	46/52 (88%)
		Zn-ribbon_RPB9	74..124	CDD:259793	34/49 (69%)