DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Polr2I and TCEA3

DIOPT Version :10

Sequence 1:NP_731898.1 Gene:Polr2I / 41741 FlyBaseID:FBgn0004855 Length:129 Species:Drosophila melanogaster
Sequence 2:XP_016857689.1 Gene:TCEA3 / 6920 HGNCID:11615 Length:487 Species:Homo sapiens


Alignment Length:45 Identity:15/45 - (33%)
Similarity:23/45 - (51%) Gaps:2/45 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
            |:...|.||..:...:.|.|||.|:|.|..:.:|  ..|.:||.:
Human   305 TDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLC--NECGNRWKD 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Polr2INP_731898.1 RPB9 19..129 CDD:441202 15/43 (35%)
Zn-ribbon_RPB9 78..128 CDD:259793 14/42 (33%)
TCEA3XP_016857689.1 TFSII 5..346 CDD:273592 14/42 (33%)

Return to query results.
Submit another query.