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Protein Alignment Polr2I and Polr3k

DIOPT Version :10

Sequence 1:	NP_731898.1	Gene:	Polr2I / 41741	FlyBaseID:	FBgn0004855	Length:	129	Species:	Drosophila melanogaster
Sequence 2:	NP_080177.1	Gene:	Polr3k / 67005	MGIID:	1914255	Length:	108	Species:	Mus musculus

Alignment Length:	110	Identity:	34/110 - (30%)
Similarity:	50/110 - (45%)	Gaps:	5/110 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    20 FCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
            ||..|.|.|..:|.:  :...:||..|.|.......  ..|:...::.|:..::....:...:..
Mouse     4 FCPGCGNGLIVEEGQ--RCHRFACNTCPYVHNITRK--VTNRKYPKLKEVDDVLGGAAAWENVDS 64

  Fly    85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
            |.: .||||.|..|.|.|.|||.|:|.|..:|.|.|..|.|||.:
Mouse    65 TAE-PCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.