Protein Alignment RpII15 and Polr1h

DIOPT Version :9

• Sequence 1: NP_001247099.1
• Gene: RpII15 / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: NP_001342351.1
• Gene: Polr1h / 66136
• MGIID: 1913386
• Length: 123
• Species: Mus musculus
• Alignment Length: 111
• Identity: 29/111 - (26%)
• Similarity: 46/111 - (41%)
• Gaps: 22/111 - (19%)

  Fly    20 FCQECNNMLYPKEDKENKILLYAC------RNCDYKQEADSNCIYVNK----IMHEIDELTHIVP 74
            ||.:|.::| |....::.::...|      |:|:.|....|  :..||    |...:||...:..
Mouse    16 FCPDCGSVL-PLPGIQDTVICSRCGFSIDVRDCEGKVVKTS--VVFNKLGATIPLSVDEGPELQG 77

  Fly    75 DVISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTN 120
            .||         |..||:|.|....:...|.|.|:|...::|.|.|
Mouse    78 PVI---------DRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCIN 114

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII15	NP_001247099.1	RPB9	18..129	CDD:224510	29/111 (26%)
		Zn-ribbon_RPB9	78..128	CDD:259793	12/43 (28%)
Polr1h	NP_001342351.1	OrfB_Zn_ribbon	<17..46	CDD:332395	5/29 (17%)
		Zn-ribbon_RPA12	76..122	CDD:259792	14/48 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810