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Protein Alignment RpII15 and polr3k
DIOPT Version :9
Sequence 1: | NP_001247099.1 |
Gene: | RpII15 / 41741 |
FlyBaseID: | FBgn0004855 |
Length: | 129 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001016313.1 |
Gene: | polr3k / 548520 |
XenbaseID: | XB-GENE-5913354 |
Length: | 108 |
Species: | Xenopus tropicalis |
Alignment Length: | 120 |
Identity: | 38/120 - (31%) |
Similarity: | 50/120 - (41%) |
Gaps: | 25/120 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 FCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKI-------MHEIDELTHIVPDVI 77
||..|.|:|..:|.: |...:||..|.|....: .|: :.|:| ||:
Frog 4 FCPTCGNVLIVEEGQ--KCYRFACNTCPYVHNVN------RKVTSRKYPKLKEVD-------DVL 53
Fly 78 SDPTLPRTED---HACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
.........| ..||||.|..|.|.|.|||.|:|.|..:|.|.|..|.|||.:
Frog 54 GGSAAWENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWRD 108
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D579891at33208 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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