Protein Alignment RpII15 and polr1h

DIOPT Version :9

• Sequence 1: NP_001247099.1
• Gene: RpII15 / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: NP_001013572.1
• Gene: polr1h / 541428
• ZFINID: ZDB-GENE-050320-131
• Length: 118
• Species: Danio rerio
• Alignment Length: 108
• Identity: 27/108 - (25%)
• Similarity: 46/108 - (42%)
• Gaps: 15/108 - (13%)

  Fly    18 IRFCQECNNMLYPKEDKENKILLYACRNCDYK---QEADSNCIYVNKIMHEIDELTHIVPDV--- 76
            :.||.||.|:| |...:.|.|   .|..|.:|   |:..|..|..:.:.:.:|:....|...
Zfish     8 VDFCPECGNIL-PLPSRLNTI---TCPRCSFKISVQDFTSQVIKSSVMFNPLDQSNVAVGSAEDA 68

  Fly    77 -ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVC 118
             :..|.:    |..|.:|:....|:...|.|.|:|...:::.|
Zfish    69 ELKGPVI----DRKCSRCNKEGMVYHTRQMRSADEGQTVFFTC 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII15	NP_001247099.1	RPB9	18..129	CDD:224510	27/108 (25%)
		Zn-ribbon_RPB9	78..128	CDD:259793	10/41 (24%)
polr1h	NP_001013572.1	RPB9	10..117	CDD:224510	27/106 (25%)
		Zn-ribbon_RPA12	71..117	CDD:259792	10/41 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910