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Protein Alignment RpII15 and Polr3k
DIOPT Version :9
Sequence 1: | NP_001247099.1 |
Gene: | RpII15 / 41741 |
FlyBaseID: | FBgn0004855 |
Length: | 129 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001014281.1 |
Gene: | Polr3k / 366277 |
RGDID: | 1587294 |
Length: | 108 |
Species: | Rattus norvegicus |
Alignment Length: | 110 |
Identity: | 34/110 - (30%) |
Similarity: | 50/110 - (45%) |
Gaps: | 5/110 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 FCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
||..|.|.|..:|.: :...:||..|.|....... ..|:...::.|:..::....:...:..
Rat 4 FCPGCGNGLIVEEGQ--RCHRFACNTCPYVHNITRK--VTNRKYPKLKEVDDVLGGAAAWENVDS 64
Fly 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
|.: .||||.|..|.|.|.|||.|:|.|..:|.|.|..|.|||.:
Rat 65 TAE-PCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1594 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D579891at33208 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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