Protein Alignment RpII15 and Med26

DIOPT Version :9

• Sequence 1: NP_001247099.1
• Gene: RpII15 / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: XP_038950406.1
• Gene: Med26 / 306328
• RGDID: 1309524
• Length: 609
• Species: Rattus norvegicus
• Alignment Length: 27
• Identity: 13/27 - (48%)
• Similarity: 15/27 - (55%)
• Gaps: 6/27 - (22%)

  Fly    65 EIDELTHIVPDVISD---PT--LPRTE 86
            :|..||...| |.:|   ||  |||||
  Rat   442 QIRPLTQKEP-VRADSPVPTEQLPRTE 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII15	NP_001247099.1	RPB9	18..129	CDD:224510	13/27 (48%)
		Zn-ribbon_RPB9	78..128	CDD:259793	8/14 (57%)
Med26	XP_038950406.1	TFS2N	47..107	CDD:197766
		Med26_M	199..426	CDD:406186
		Med26_C	428..607	CDD:406185	13/27 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900