Protein Alignment RpII15 and rpb-9

DIOPT Version :9

• Sequence 1: NP_001247099.1
• Gene: RpII15 / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: NP_505062.1
• Gene: rpb-9 / 179178
• WormBaseID: WBGene00022400
• Length: 167
• Species: Caenorhabditis elegans
• Alignment Length: 118
• Identity: 82/118 - (69%)
• Similarity: 104/118 - (88%)
• Gaps: 0/118 - (0%)

  Fly    12 GPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
            |||||||:||.||||||||:||||:::|:|:||||::::.|.:.||||||::|||||||.||.|:
 Worm    50 GPGFVGIKFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVGDI 114

  Fly    77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
            |.|||||:||:|.||.|...:||||||||::|||||||||||.:|:|.|||||
 Worm   115 IHDPTLPKTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRWTE 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII15	NP_001247099.1	RPB9	18..129	CDD:224510	74/110 (67%)
		Zn-ribbon_RPB9	78..128	CDD:259793	34/49 (69%)
rpb-9	NP_505062.1	RPB9	56..167	CDD:224510	74/110 (67%)
		Zn-ribbon_RPB9	116..166	CDD:259793	34/49 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158841
Domainoid	1	1.000	70	1.000	Domainoid score	I6238
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4541
Inparanoid	1	1.050	197	1.000	Inparanoid score	I2504
Isobase	1	0.950	-	0	Normalized mean entropy	S446
OMA	1	1.010	-	-		QHG55234
OrthoDB	1	1.010	-	-		D1421187at2759
OrthoFinder	1	1.000	-	-		FOG0003781
OrthoInspector	1	1.000	-	-		oto18606
orthoMCL	1	0.900	-	-		OOG6_102455
Panther	1	1.100	-	-	LDO	PTHR11239
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4217
SonicParanoid	1	1.000	-	-		X2636
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	18	17.750