DRSC/TRiP Functional Genomics Resources

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Protein Alignment Polr2I and TfIIS

DIOPT Version :10

Sequence 1:NP_731898.1 Gene:Polr2I / 41741 FlyBaseID:FBgn0004855 Length:129 Species:Drosophila melanogaster
Sequence 2:XP_061516042.1 Gene:TfIIS / 1279994 VectorBaseID:AGAMI1_002375 Length:339 Species:Anopheles gambiae


Alignment Length:70 Identity:24/70 - (34%)
Similarity:34/70 - (48%) Gaps:11/70 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DELTHI----VPDVISDPTL-----PRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQN 122
            ||:.|:    |.:.|:|..|     .:|:...|.||..|...:.|.|||.|:|.|..:.:|  ..
Mosquito   269 DEMKHLRDRFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMC--NE 331

  Fly   123 CTHRW 127
            |.|||
Mosquito   332 CGHRW 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Polr2INP_731898.1 RPB9 19..129 CDD:441202 24/70 (34%)
Zn-ribbon_RPB9 78..128 CDD:259793 19/55 (35%)
TfIISXP_061516042.1 None

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