Protein Alignment RpII15 and polr2i

DIOPT Version :9

• Sequence 1: NP_001247099.1
• Gene: RpII15 / 41741
• FlyBaseID: FBgn0004855
• Length: 129
• Species: Drosophila melanogaster
• Sequence 2: XP_002932661.1
• Gene: polr2i / 100101756
• XenbaseID: XB-GENE-922120
• Length: 125
• Species: Xenopus tropicalis
• Alignment Length: 117
• Identity: 93/117 - (79%)
• Similarity: 103/117 - (88%)
• Gaps: 0/117 - (0%)

  Fly    13 PGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
            ||||||||||||||||||||||||:|||||||||||:||||::|||||||.|||||||.|:.||.
 Frog     9 PGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEIDELTQIIADVA 73

  Fly    78 SDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
            .||||||||||.|.||.|:||||||:.:.|||:.||||||||..:|.|||||
 Frog    74 QDPTLPRTEDHPCSKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII15	NP_001247099.1	RPB9	18..129	CDD:224510	86/110 (78%)
		Zn-ribbon_RPB9	78..128	CDD:259793	34/49 (69%)
polr2i	XP_002932661.1	RPB9	14..125	CDD:224510	86/110 (78%)
		Zn-ribbon_RPB9	74..124	CDD:259793	34/49 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	81	1.000	Domainoid score	I8435
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H4541
Inparanoid	1	1.050	181	1.000	Inparanoid score	I3874
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1421187at2759
OrthoFinder	1	1.000	-	-		FOG0003781
OrthoInspector	1	1.000	-	-		oto102179
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2636
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	8.060