DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and Zfp966

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001170878.1 Gene:Zfp966 / 667962 MGIID:3709288 Length:485 Species:Mus musculus


Alignment Length:465 Identity:138/465 - (29%)
Similarity:207/465 - (44%) Gaps:77/465 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 EHVCGKCYKTFR------RVQSLKKHLEF--CRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDIC 275
            ||.....::|.|      |..|.::|.||  |.....|..|                        
Mouse    68 EHTIEDHFQTSRSHGRHERRSSAEQHSEFIPCGKAFAYQSR------------------------ 108

  Fly   276 FCCSESYDTFHLG--HINCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHE 338
               |:.:...|.|  |..|..|.|.|.|::..:| :..||:....:.|:.........:.|.:|:
Mouse   109 ---SQRHVRIHNGEKHYECNQCGKDFGTRSVLQR-LKRTHTGEKPYECNHYGKAFAESSTLQIHK 169

  Fly   339 EQHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHL 403
            .:|... |||.|..|.|.|.:...|:.|::..:...    ...||.|.:.|.:..:|..|.:.|.
Mouse   170 RKHTGE-KPYECNHCVKAFAKMSKLQIHKRIHTGEK----PYECKQCGKAFTQSSHLGIHKRTHT 229

  Fly   404 GTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKP 468
            |    :|| |.|..|...|...|||..|.:|||||||::|..|||.|.....|:.|:|.||||||
Mouse   230 G----EKP-YECKQCGKAFTRSSTLQTHKQTHTGEKPYECKQCDKAFVRRGELQIHKRTHTGEKP 289

  Fly   469 YSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKTHI--RPFPCEQCDEK 531
            |.|..|.:|||....|..|.:.||||:|::|.:|||:|..::.|:.|.:||.  :|:.|:|||:.
Mouse   290 YECKQCGKAFAQSGTLQIHKRTHTGEKPYECKQCGKAFAHSSTLQIHKRTHTGEKPYECKQCDKA 354

  Fly   532 FKTEKQLERHVKTHSRTKRPVFSCAECKRNFRTPALLKEHMDEGKHSPKQQRSSMRS-------- 588
            |....:|:.|.:||:..|  .:.|.:|.:.|.....|:.|  |..|:.::.....:.        
Mouse   355 FVKRGELQIHKQTHTGEK--PYECKQCGKAFAQSGTLQVH--ERTHTGEKPFECNQCGKAFVQCI 415

  Fly   589 AVKIMERT-------DCAICDKNFDSSDTLRRHIRTVHECDPDDIFGVEPHPSKRAKKDIESEEV 646
            |::|.|||       :|..|.|.|..|:||:.|.|| |.       |.:|:..|:..|.......
Mouse   416 ALRIHERTHTGEKPYECKQCGKAFAHSNTLQIHKRT-HT-------GEKPYECKQCGKAFAHSST 472

  Fly   647 VPVALNTSAG 656
            :.:...|..|
Mouse   473 LQIHKQTHTG 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 6/20 (30%)
COG5048 <312..517 CDD:227381 74/204 (36%)
C2H2 Zn finger 321..341 CDD:275368 3/19 (16%)
zf-C2H2 348..368 CDD:278523 7/19 (37%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-H2C2_2 428..451 CDD:290200 13/22 (59%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..479 CDD:290200 13/23 (57%)
COG5048 <467..620 CDD:227381 57/169 (34%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
zf-H2C2_2 484..508 CDD:290200 12/23 (52%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 4/16 (25%)
C2H2 Zn finger 598..615 CDD:275371 7/16 (44%)
Zfp966NP_001170878.1 KRAB 22..63 CDD:366587
COG5048 94..478 CDD:227381 129/433 (30%)
C2H2 Zn finger 99..116 CDD:275368 4/43 (9%)
C2H2 Zn finger 124..144 CDD:275368 6/20 (30%)
C2H2 Zn finger 152..172 CDD:275368 3/19 (16%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
C2H2 Zn finger 376..396 CDD:275368 6/21 (29%)
C2H2 Zn finger 404..424 CDD:275368 4/19 (21%)
C2H2 Zn finger 432..452 CDD:275368 10/20 (50%)
C2H2 Zn finger 460..480 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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