DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and vezf1b

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001073432.1 Gene:vezf1b / 556915 ZFINID:ZDB-GENE-060825-121 Length:460 Species:Danio rerio


Alignment Length:256 Identity:76/256 - (29%)
Similarity:109/256 - (42%) Gaps:51/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 EEQHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCSS--------NETDTMSCKVCDRVFYRLDN 394
            :::.||: .|:.|..|.|.|..||||:||:   ||.:        .:|.|....|........||
Zfish    82 KKEPKSK-TPFICSYCSKAFRDSYHLRRHE---SCHTGIKMVSRPKKTTTAPTMVPLISTVPRDN 142

  Fly   395 --------------------------LRSHLKQHLGTQVVKKP------EYMCHTCKNCFYSLST 427
                                      :.|.|.|...| |.|||      .:.|..|...|..:..
Zfish   143 NGNPSYVSTVAGILTTATTSASTAAGIMSVLPQQQPT-VPKKPPKPVKKNHGCEMCGKAFRDVYH 206

  Fly   428 LNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTG--EKPYSCTVCNQAFAVKEVLNRHMKR 490
            ||.|..:|:.||||:|.:|.::|.....:..|.|.|.|  .|||.|:||.:.|:..:.|:.|:|.
Zfish   207 LNRHKLSHSDEKPFECPICHQRFKRKDRMTYHVRSHDGGVHKPYICSVCGKGFSRPDHLSCHVKH 271

  Fly   491 -HTGERPHKCD--ECGKSFIQATQLRTHSKTHIRPFPCEQCDEKFKTEKQLERHVKTHSRT 548
             |:.|||.||.  .|..:|....:||:|...|.....|..|. |..:...:..|:|||.:|
Zfish   272 VHSTERPFKCQVTACTSAFATKDRLRSHMIRHEGKVTCNICG-KMLSAAYITSHLKTHGQT 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368
COG5048 <312..517 CDD:227381 67/223 (30%)
C2H2 Zn finger 321..341 CDD:275368 0/2 (0%)
zf-C2H2 348..368 CDD:278523 10/19 (53%)
C2H2 Zn finger 350..368 CDD:275368 10/17 (59%)
C2H2 Zn finger 382..402 CDD:275368 5/45 (11%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-H2C2_2 428..451 CDD:290200 10/22 (45%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
zf-H2C2_2 455..479 CDD:290200 10/25 (40%)
COG5048 <467..620 CDD:227381 30/85 (35%)
C2H2 Zn finger 471..491 CDD:275368 7/20 (35%)
zf-H2C2_2 484..508 CDD:290200 11/26 (42%)
C2H2 Zn finger 499..519 CDD:275368 6/21 (29%)
C2H2 Zn finger 525..545 CDD:275368 5/19 (26%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
vezf1bNP_001073432.1 C2H2 Zn finger 93..113 CDD:275368 11/22 (50%)
C2H2 Zn finger 194..214 CDD:275368 6/19 (32%)
zf-H2C2_2 206..231 CDD:290200 11/24 (46%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..270 CDD:275368 6/17 (35%)
C2H2 Zn finger 281..303 CDD:275368 6/21 (29%)
C2H2 Zn finger 309..328 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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