DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and Zfp652

DIOPT Version :10

Sequence 1:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001073676.1 Gene:Zfp652 / 497984 RGDID:1566329 Length:608 Species:Rattus norvegicus


Alignment Length:567 Identity:144/567 - (25%)
Similarity:226/567 - (39%) Gaps:133/567 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASKEGKEKKG---KLLGVENISPP----KDKRPATR-MKLLNDV-GAGEDSEASTTTTTSRTPSN 58
            ::|..|.:.|   .:|....:|.|    .:::|..| .:.::|| ...||.|.|..|......|.
  Rat    47 STKVYKRESGSPYSVLADSKMSKPHLHETEEQPYFREPRAVSDVHTVKEDRENSDDTEEEEEVSY 111

  Fly    59 KQEKRGSVAGSRIKI-LNEEILGTPKTEKRGATKSTAPAASTVKILNEKKTPSATVTAVETTKIK 122
            |:|:      ..::: ||.:.|...|.||..:::|             |:||          .:|
  Rat   112 KREQ------IIVEVNLNNQTLNVSKGEKGVSSQS-------------KETP----------VLK 147

  Fly   123 TSPSKRKKMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEVVPGRIENNNGQEIVVTE 187
            ||                ||..:.:      ||||                           .|:
  Rat   148 TS----------------SEEEEEE------TEED---------------------------ATD 163

  Fly   188 DDEDLGEDG-DEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLR 251
            :..|.||:| .:..|....|...:|.:.:............|.|..:..:|..|..:       |
  Rat   164 NSSDYGENGRQKKKEKQVEKVRVTQRRTRRAASVAAATTSPTPRTTRGRRKSAELPK-------R 221

  Fly   252 KADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEF 316
            |....|     |..|.|.:.|     |.|. :|     :.|..||:.|.|:...|:|:.:||...
  Rat   222 KKRAAK-----EPKAPVQKAK-----CDEK-ET-----LTCEKCPRVFNTRWYLEKHMNVTHRRM 270

  Fly   317 SDFPCSICNANLRSEALLALHEEQHKSRGKPYACKICGKDFTRSYHLKRHQK----YSSCSSNET 377
            .  .|..|......|:.|:||  |.....|...|..|.|.|.:.:.|..|.|    |:.      
  Rat   271 Q--ICDKCGKKFVLESELSLH--QQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAE------ 325

  Fly   378 DTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFD 442
            ...:|::|::.||.:.::|.|:..|     .|...:.|.||...|....:|.:|...|:|||||.
  Rat   326 KKFACEICEKKFYTMAHVRKHMVAH-----TKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFR 385

  Fly   443 CDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFI 507
            |:.||::|.....|:.|...|.|.|.:.|..|.:.|.:|:..:.|||.||||:|..|:.|||||.
  Rat   386 CENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFT 450

  Fly   508 QATQLRTHSKTHI--RPFPCEQCDEKFKTEKQLERHVKTHSRTKRPV 552
            ....::.|.:||.  :|:||:.|.::|:....|:.|.:...|...||
  Rat   451 SRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPV 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 7/20 (35%)
COG5048 <312..517 CDD:227381 66/208 (32%)
C2H2 Zn finger 321..341 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
COG5048 <467..620 CDD:227381 32/88 (36%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 5/19 (26%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Zfp652NP_001073676.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..234 51/263 (19%)
C2H2 Zn finger 246..265 CDD:275368 7/18 (39%)
C2H2 Zn finger 273..292 CDD:275368 7/20 (35%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
SFP1 <380..463 CDD:227516 34/82 (41%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
COG5048 438..>487 CDD:227381 16/48 (33%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
zf-H2C2_2 454..477 CDD:463886 7/22 (32%)
C2H2 Zn finger 470..486 CDD:275368 4/15 (27%)
Mediates interaction with CBFA2T3. /evidence=ECO:0000250 497..608 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 540..589
Blue background indicates that the domain is not in the aligned region.

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