DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and sens

DIOPT Version :10

Sequence 1:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster


Alignment Length:538 Identity:115/538 - (21%)
Similarity:183/538 - (34%) Gaps:156/538 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 STAPAASTVKILNEKKTPSATVTAVETTKIKTSPSKRKKMEHYVLQAVKSENTKADTTVTVVTEE 156
            |:|.|..|.......|:|::.|..........:|.|    ||.:.....:||:|.|     ..|:
  Fly    76 SSATALGTPLTPMTPKSPASVVLGQRDRDFALTPEK----EHELQMNNNNENSKQD-----YQEQ 131

  Fly   157 DDTIDFILADDEEVVPGRIENNNGQEIVVTEDDEDLGEDGDEDGEDSSGKGNSS----------- 210
            |:.:...|:..|.               :|.||.:  .|......::|.:.:||           
  Fly   132 DEDMPLNLSTKER---------------ITSDDSN--RDQYHSSSNNSSRSSSSSEVEQLHPMTS 179

  Fly   211 -----------------------QTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRK 252
                                   |.....|:......|.::.||.|              |.| |
  Fly   180 LNVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQ--------------YGL-K 229

  Fly   253 ADMLKNLEKIEKDAVVMEKKDICFCCSESYD--TFHLGHINCP----DCPKSFKTQ-TSYERHIF 310
            .:...:.|:.:.|.:|.:.|         |:  |..:..:..|    ..|.|...| ..:|....
  Fly   230 MEEQGDEEEHQVDPIVRKFK---------YERRTASISSLQSPISSLSAPASNAVQDLEFEVAQQ 285

  Fly   311 ITHSEFSDFPCSICNANLRSEAL---LALHEEQHKSRGKPYACK----------------ICGKD 356
            ..::..|.|...:...||  |.|   |.|..||.:.:.:.:..|                :...:
  Fly   286 QLYAHRSAFMAGLTGNNL--ELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAE 348

  Fly   357 F--TRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQH---LGTQVVKKP----- 411
            |  .|:.|.:..|:......::.....              ..|.:||   ..|.|.::.     
  Fly   349 FGYMRNQHQQPQQQQQQQLHHQQQPQQ--------------HQHQQQHPDSTATDVARRSSSSSS 399

  Fly   412 ------------EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHT 464
                        .:.|..|...|...|||:.|:..|:..:|:.|..|.|:|.....:|||...||
  Fly   400 YQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHT 464

  Fly   465 GEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKT-HIRPFPCEQC 528
            ||||:.||||.:||:....|..||::|||.:|..|..|.:||.:...||.|.:: |....|.|..
  Fly   465 GEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRHEEAPPVEDL 529

  Fly   529 DEKFKTEKQLERHVKTHS 546
                   |.|:..|.:.|
  Fly   530 -------KPLKMEVSSSS 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 5/25 (20%)
COG5048 <312..517 CDD:227381 62/245 (25%)
C2H2 Zn finger 321..341 CDD:275368 7/22 (32%)
C2H2 Zn finger 350..368 CDD:275368 4/35 (11%)
C2H2 Zn finger 382..402 CDD:275368 1/19 (5%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
COG5048 <467..620 CDD:227381 29/81 (36%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
C2H2 Zn finger 499..519 CDD:275368 7/20 (35%)
C2H2 Zn finger 525..545 CDD:275368 4/19 (21%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 7/21 (33%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-C2H2 441..463 CDD:395048 7/21 (33%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..480 CDD:463886 15/24 (63%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
zf-H2C2_2 483..506 CDD:463886 9/22 (41%)
C2H2 Zn finger 499..516 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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