DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG31365

DIOPT Version :10

Sequence 1:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_732827.1 Gene:CG31365 / 42736 FlyBaseID:FBgn0051365 Length:639 Species:Drosophila melanogaster


Alignment Length:525 Identity:128/525 - (24%)
Similarity:191/525 - (36%) Gaps:164/525 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EEILGTPKTEKRGATKSTAPAASTVKILNEKKTPSATVTAVETTKIKTSPSKRKKMEHYVLQAVK 140
            |.:.|:....|....:..:|:.|..|.| .|:.||.....::.|:.:    |..|.|.::|..  
  Fly   227 ESLDGSEPETKPQVKEDASPSRSKTKAL-PKRRPSLVDANLKATEAR----KDAKEEEFILGC-- 284

  Fly   141 SENTKADTTVTVVTEEDDTIDFILADDEEVVPG------RIENNNGQEIVVTEDDE------DLG 193
              ||..      ....|..||.:..|:|  ||.      |..|..|.::|.|::.|      ...
  Fly   285 --NTDP------ANNSDVNIDGLELDEE--VPAESGEDFREINMVGSDVVHTDNGEIYIINSASS 339

  Fly   194 EDGDEDGEDSSGKGNS-SQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLK 257
            ||.::|......:.|. :...|||..|                   ::|    ||         :
  Fly   340 EDQNQDSTPEFDQDNGITSYNIKEDGE-------------------IQF----SG---------E 372

  Fly   258 NLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSDFPCS 322
            ..|:|| |.||                |:||.            :.|.|:.:|..|         
  Fly   373 KPEEIE-DVVV----------------FNLGE------------EISQEQQVFSFH--------- 399

  Fly   323 ICNANLRSEALLALHEEQH-KSRGKPYACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCD 386
                    |.::.:.:||: :....|...|       ||..|...|: |||...:|..:      
  Fly   400 --------ENVIIVEKEQNDRDEQTPLKRK-------RSSELVFKQE-SSCPQPKTGRI------ 442

  Fly   387 RVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTH-TGEK-----PFDCDL 445
                              |..||  .:.||.|...|.:...|..|..|| .|.|     ...|..
  Fly   443 ------------------TDTVK--SFQCHLCPVAFPTQKLLTRHHNTHIKGLKSGKGGTLKCPS 487

  Fly   446 CDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQAT 510
            |..:.|...:||:|...|||.||:.|:.|..:|:.:|||.|||..|||.:.|:|.:|...|.|.:
  Fly   488 CALQLSCASSLKRHMIIHTGLKPFKCSECELSFSQREVLKRHMDTHTGVKRHQCPQCSSCFAQKS 552

  Fly   511 QLRTH--------SKTHIRPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNFRTPAL 567
            .|:.|        |:||    .|..|...|.....|.||:.||:..   :|||.:|.|.|...:.
  Fly   553 NLQQHIGRVHMGNSRTH----KCHLCHRSFNHVSGLSRHLVTHAGV---MFSCKQCGRQFNDRSA 610

  Fly   568 LKEHM 572
            ::.|:
  Fly   611 VQRHV 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 3/20 (15%)
COG5048 <312..517 CDD:227381 57/219 (26%)
C2H2 Zn finger 321..341 CDD:275368 2/19 (11%)
C2H2 Zn finger 350..368 CDD:275368 4/17 (24%)
C2H2 Zn finger 382..402 CDD:275368 0/19 (0%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
COG5048 <467..620 CDD:227381 39/114 (34%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
C2H2 Zn finger 499..519 CDD:275368 7/27 (26%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..572 CDD:275368 4/16 (25%)
C2H2 Zn finger 598..615 CDD:275371
CG31365NP_732827.1 zf-AD 13..86 CDD:214871
PTZ00121 <110..354 CDD:173412 33/143 (23%)
zf-C2H2_8 454..542 CDD:464935 32/87 (37%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
zf-H2C2_2 497..522 CDD:463886 11/24 (46%)
C2H2 Zn finger 513..533 CDD:275368 9/19 (47%)
zf-H2C2_2 526..550 CDD:463886 11/23 (48%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 571..591 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..617 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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