DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG10147

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001261477.1 Gene:CG10147 / 38733 FlyBaseID:FBgn0035702 Length:448 Species:Drosophila melanogaster


Alignment Length:430 Identity:99/430 - (23%)
Similarity:159/430 - (36%) Gaps:132/430 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 IVVTEDDEDLGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFC----- 242
            :||..||:|:                        :...:|.:||:...:..|.:   ..|     
  Fly    39 LVVDPDDQDI------------------------LPSEICSECYELLEKFHSFR---ALCIIADN 76

  Fly   243 --RYDSGYHLRKADMLKNL--------EKIEKDAVVMEKKDICFC-------------------- 277
              |..|....:|.|..|.:        |::|.:.:::|..::..|                    
  Fly    77 KWRSKSLVTWKKIDRRKPVYEVDEDEEEELELEELLLEPPEMIICDTNLSAQNTPIVAEQAPPTL 141

  Fly   278 -----------------------------CSESYDTF------------HLGHI--NC--PDCPK 297
                                         |....|.|            |.||:  :|  |.|.:
  Fly   142 VFHTFTENVQQPPETEKKALEEPPLTTYKCDLCADEFREEKRLILHKKEHQGHMLYHCTEPGCEE 206

  Fly   298 SFKTQTSYERHIFITHSEFS-DFPCSI--CNANLRSEALLALHEEQHKSRGKP---YACKICGKD 356
            :|....:..:| .:.|||.. .|.|..  ||...|.:|.|..|:.:....|||   :.|:.||:.
  Fly   207 AFNRFENLRQH-ELEHSEVGMRFVCEEEGCNRMYRHKASLKYHQSKAHDIGKPLKTHMCEFCGRV 270

  Fly   357 FTRSYHLKRHQKYSSCSSNETDTM----SCKV--CDRVFYRLDNLRSHLKQHLGTQVVKKPEYMC 415
            |.....|.:|:      ....|.:    :|::  |...||..:.|:.|:.:|.|.:     .:.|
  Fly   271 FKTGSALSQHR------FTHGDQLVLPYACELPECSMRFYSTEKLKIHMMRHQGIK-----NFSC 324

  Fly   416 HTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH-RRYHTGEKPYSCTVCNQAFA 479
            ..|.....:.:.|.:||..||.|:.:.|..|.|..::..:|||| |..|...:.|:|:.|.:.||
  Fly   325 PYCGLKKTTKNELRLHINYHTLERTWSCKDCPKVCNSSTSLKKHIRAIHEKARDYACSYCEKKFA 389

  Fly   480 VKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKTH 519
            ..:....|...||||:..:|..|||.|||.:.||||.|.|
  Fly   390 TTDTRKYHEMTHTGEKNFECHVCGKKFIQPSALRTHRKVH 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/22 (23%)
COG5048 <312..517 CDD:227381 67/217 (31%)
C2H2 Zn finger 321..341 CDD:275368 7/21 (33%)
zf-C2H2 348..368 CDD:278523 6/19 (32%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 6/21 (29%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-H2C2_2 428..451 CDD:290200 9/22 (41%)
C2H2 Zn finger 443..463 CDD:275368 8/20 (40%)
zf-H2C2_2 455..479 CDD:290200 9/24 (38%)
COG5048 <467..620 CDD:227381 23/53 (43%)
C2H2 Zn finger 471..491 CDD:275368 5/19 (26%)
zf-H2C2_2 484..508 CDD:290200 10/23 (43%)
C2H2 Zn finger 499..519 CDD:275368 12/19 (63%)
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
CG10147NP_001261477.1 zf-AD 7..80 CDD:214871 10/67 (15%)
C2H2 Zn finger 171..191 CDD:275368 3/19 (16%)
zf-C2H2_8 199..287 CDD:292531 25/94 (27%)
C2H2 Zn finger 199..221 CDD:275368 5/22 (23%)
C2H2 Zn finger 230..253 CDD:275368 7/22 (32%)
C2H2 Zn finger 264..284 CDD:275368 6/25 (24%)
C2H2 Zn finger 294..316 CDD:275368 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 5/19 (26%)
C2H2 Zn finger 409..429 CDD:275368 12/19 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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