DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG17385

DIOPT Version :10

Sequence 1:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_610962.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster


Alignment Length:294 Identity:84/294 - (28%)
Similarity:133/294 - (45%) Gaps:50/294 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 NET--DTMSCKVCDRVFYRLDNLRSHLKQHLGTQVV---KKPEYMCHTCKNCFYSLSTLNIHIRT 434
            :||  :..|||.|||.|      ||...|.|..|.|   .|..|.|..|...|.:...|:.|::.
  Fly     9 DETVANQFSCKRCDRTF------RSKRDQTLHRQEVHNHNKTTYECKLCAKSFCNSGNLDRHMKV 67

  Fly   435 HTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKC 499
            |...:||.|::|.|.|:..|.|::|...|:||:|::|..||::|..:..:.||...||||:|.:|
  Fly    68 HNDVRPFVCNICSKAFAQAVNLQRHYAVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRC 132

  Fly   500 DECGKSFIQATQLRTHSKTHI--RPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNF 562
            ..||:.|.|...|:.|...|:  :|:.|..|::.|......:||:::|.:....|...|..:   
  Fly   133 QRCGRYFSQLVNLKKHKLGHLNAKPYQCNYCEKGFTQLSNFKRHLQSHIKEGVDVDVPASIQ--- 194

  Fly   563 RTPALLKEHMDEGKHSPKQQRSSMRSAVKIMERTDCAICDKNFDSSDTLRRHIRTVHE------- 620
            ...||.:|.::      .:|:.|.         .:|.:|...||:.....:|....||       
  Fly   195 AAAALARERLE------SEQKPSF---------FECMVCRAIFDTFADYEKHEAKCHEDHERAQL 244

  Fly   621 -------CDPDDIFGVEPHPSKRAKKDIESEEVV 647
                   ..|||..     |.|.|..|:::.|::
  Fly   245 EVNQMSHMHPDDYL-----PMKFAVPDLDTHEII 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368
COG5048 <312..517 CDD:227381 54/146 (37%)
C2H2 Zn finger 321..341 CDD:275368
C2H2 Zn finger 350..368 CDD:275368
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
COG5048 <467..620 CDD:227381 39/154 (25%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 5/19 (26%)
C2H2 Zn finger 555..572 CDD:275368 4/16 (25%)
C2H2 Zn finger 598..615 CDD:275371 4/16 (25%)
CG17385NP_610962.1 COG5048 <13..181 CDD:227381 59/173 (34%)
C2H2 Zn finger 18..39 CDD:275368 11/26 (42%)
C2H2 Zn finger 48..68 CDD:275368 5/19 (26%)
C2H2 Zn finger 76..96 CDD:275368 7/19 (37%)
C2H2 Zn finger 104..124 CDD:275368 6/19 (32%)
C2H2 Zn finger 132..148 CDD:275368 6/15 (40%)
C2H2 Zn finger 160..180 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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