DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and Zbtb48

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:XP_038966377.1 Gene:Zbtb48 / 362668 RGDID:1311581 Length:739 Species:Rattus norvegicus


Alignment Length:560 Identity:115/560 - (20%)
Similarity:161/560 - (28%) Gaps:236/560 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LQAVKSENTKADTTVTVVTEEDDTIDFILADDEEVVPGRIENNNGQEIVVTEDDEDLGEDGDEDG 200
            |:.|...:..||      .|.:|:.:.....:.|..|.:.|:|..:.:|..|||.|  .|||...
  Rat   186 LKQVLKPSPPAD------KESEDSKEPPRPFEAEGAPLQGESNEWEVVVQVEDDRD--GDGDYAS 242

  Fly   201 EDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKD 265
            |..:                     ..|.|:.:.::|.   |..:..  |....:.....:..|.
  Rat   243 EPET---------------------VLTRRKSKVIRKP---CAAEPA--LGAGSLTAEPTEGRKG 281

  Fly   266 AVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRS 330
            |.|                    .:.||.|.|.|                             .|
  Rat   282 AAV--------------------PVECPTCHKKF-----------------------------LS 297

  Fly   331 EALLALHEEQHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNL 395
            :..|.:|..:|... ||:.|..|||.:.|..:|..|:. .:|.:......:|.||...|.|...|
  Rat   298 KYYLKVHNRKHTGE-KPFECPKCGKCYFRKENLLEHEA-RNCMNRSEQVFTCSVCQETFRRRMEL 360

  Fly   396 RSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIH-IRTHTGEKP------------------- 440
            |.|:..|.|     :..|.|.:|...|.....|..| |:.|...||                   
  Rat   361 RVHMVSHTG-----EMPYKCSSCSQQFMQKKDLQSHMIKLHGAPKPHAVSAKQGWGSCGPWTAQP 420

  Fly   441 -----------------------------FDC----------DLCDKK----------------- 449
                                         :.|          .||.|.                 
  Rat   421 CPHLDSLPLPVSPSCSAPLVPSASCLGRSYSCTRLLSIVEKSSLCVKNVGTGPQAAMGCRCTSRP 485

  Fly   450 ----------------------------------------------------------------- 449
                                                                             
  Rat   486 STGMKGRMSVSSAAMHSPRRPTSTCTCAHTQERSPSSATSVGRPSAPKVRQARPLLASGLRQVLS 550

  Fly   450 --FSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHM-KRHTGERPHKCDECGKSFIQATQ 511
              .|...:|.||.|.||||:|:||..|.|.|..|..|.||: .||...|||.|..|||:|....|
  Rat   551 STLSPTASLDKHNRTHTGERPFSCEFCEQRFTEKGPLLRHVASRHQEGRPHFCQICGKTFKAVEQ 615

  Fly   512 LRTHSKTH--IRPFPCEQCDEKFKTEKQLERHVKTHSRTK 549
            ||.|.:.|  :|.|.|.:|..||..:..|.||::.|.|.:
  Rat   616 LRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVE 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/20 (25%)
COG5048 <312..517 CDD:227381 71/348 (20%)
C2H2 Zn finger 321..341 CDD:275368 3/19 (16%)
zf-C2H2 348..368 CDD:278523 7/19 (37%)
C2H2 Zn finger 350..368 CDD:275368 7/17 (41%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..435 CDD:275368 6/20 (30%)
zf-H2C2_2 428..451 CDD:290200 10/165 (6%)
C2H2 Zn finger 443..463 CDD:275368 9/113 (8%)
zf-H2C2_2 455..479 CDD:290200 13/23 (57%)
COG5048 <467..620 CDD:227381 36/86 (42%)
C2H2 Zn finger 471..491 CDD:275368 8/20 (40%)
zf-H2C2_2 484..508 CDD:290200 13/24 (54%)
C2H2 Zn finger 499..519 CDD:275368 9/19 (47%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Zbtb48XP_038966377.1 BTB_POZ_ZBTB48_TZAP_KR3 8..115 CDD:349541
C2H2 Zn finger 288..308 CDD:275368 8/48 (17%)
zf-H2C2_2 300..323 CDD:404364 9/23 (39%)
C2H2 Zn finger 316..367 CDD:275368 16/51 (31%)
zf-C2H2 345..367 CDD:395048 8/21 (38%)
zf-H2C2_2 359..382 CDD:404364 8/27 (30%)
C2H2 Zn finger 375..396 CDD:275368 6/20 (30%)
C2H2 Zn finger 574..595 CDD:275368 8/20 (40%)
C2H2 Zn finger 603..623 CDD:275368 9/19 (47%)
zf-H2C2_2 616..640 CDD:404364 10/23 (43%)
zf-C2H2 629..651 CDD:395048 8/21 (38%)
C2H2 Zn finger 631..651 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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