DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG12391

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster


Alignment Length:676 Identity:143/676 - (21%)
Similarity:229/676 - (33%) Gaps:200/676 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASKEGKEKKGKLLGVENISPPKDKRPATRMKLL-NDVGAGEDSEASTTTTTSRTPSNKQEKRGSV 66
            |...|::::......:|     .::|..|..|. ..||:.:|   ..:.|..:.....::..|:.
  Fly     9 AETNGEQRQNPQESAQN-----QEQPQPRQDLAGKSVGSADD---GVSGTVGQIMDYLEDDAGAT 65

  Fly    67 AGSRIKILNEEILG----------TPKTEK--RGATKSTAPAASTVKILNEKKTPSATVTAVETT 119
            |....::...|.|.          ||:|||  .|..:|           :.||....:....:.:
  Fly    66 ADQDAEMGEAEYLDGEMPQEDESETPQTEKANEGCQES-----------SNKKDLQESAAKDDFS 119

  Fly   120 KIKT------SPSKRKKMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEVVPGRIENN 178
            |.|:      ...|.||..|  |....:::.:.|.......:|||...   .:||:      ...
  Fly   120 KEKSGEDGEKDTDKEKKATH--LHEDNNDDAEKDGDEADAEDEDDVEK---PEDED------GTE 173

  Fly   179 NGQEIVVTEDDED-LGEDGD------------EDGEDSSGK-------GNSSQTKIKE------I 217
            .|.|.:  |:||| |.||.|            |.|.|:.|:       |:.:...|:|      :
  Fly   174 EGDEAI--EEDEDALDEDEDPNEEVEEIEPDFETGTDAEGELITGDEPGDLADVPIRERKKEEPV 236

  Fly   218 VEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESY 282
            .|..|..|......|...||.::         ...||||.                         
  Fly   237 DEDQCRVCTSKEELVCLFKKQID---------ATPADMLL------------------------- 267

  Fly   283 DTFHLGHINCPD---CPKSFKTQTSYERHIFITHSEFSDFPCSICNANLR-------------SE 331
                   :.||:   .||.|..|                |.|:.|..:|.             .|
  Fly   268 -------VICPNVSILPKDFMPQ----------------FICTKCMGSLTIAIQLRKQLETTDQE 309

  Fly   332 ALLALHEEQHKSRGKPYACKICGKDFTRSY----HLKRHQKYS-----------SCSSNETDTMS 381
            ....|...::|.| :|....:.....|.|.    .|....|.|           |..|::::...
  Fly   310 LRKRLSRSKNKVR-RPRGYVVIDAPVTDSSEDEDELDDEFKVSDVAGTTSADSDSADSDDSEKEK 373

  Fly   382 CKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLC 446
            .|...|...|    :..||:  ||....:|.   ...|..:...||.::        .||:|..|
  Fly   374 KKPGPRGRPR----KKPLKR--GTDSDGEPS---SAQKKKYQPSSTASV--------GPFECPNC 421

  Fly   447 DKKFSALVALKKHRRYHTGEK-PYSCTVCNQAFAVKEVLNRHMKRHTGERPH-KCDECGKSFIQA 509
            |..||...:...||:.|  |: .::|.:|.:.|.|:.....||:||..||.| :|:.|.|.|   
  Fly   422 DLTFSRKQSYVLHRKTH--ERIEHACPICGKKFKVEWAYKTHMQRHEQERAHFRCELCPKIF--- 481

  Fly   510 TQLRTHSKTHIRP--------FPCEQCDEKFKTEKQLERHVKTH-SRTKRPVFSCAECKRNFRTP 565
             :||...|.|:..        :.|::|...|.|:::|:||.... .|.|.......|.:..|:..
  Fly   482 -RLRAELKHHMAQRHDEHGFIYECKRCQRTFLTQQRLQRHQAVGCQRHKEDSVRIKEEQSRFKQE 545

  Fly   566 ALLKEHMDEGKHSPKQQRSSMRSAVK 591
            :..|:....|.:|.|::....|...|
  Fly   546 SRSKDDRHHGNNSSKRRPGEGRDLFK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 6/23 (26%)
COG5048 <312..517 CDD:227381 55/234 (24%)
C2H2 Zn finger 321..341 CDD:275368 5/32 (16%)
zf-C2H2 348..368 CDD:278523 3/23 (13%)
C2H2 Zn finger 350..368 CDD:275368 3/21 (14%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 3/19 (16%)
zf-H2C2_2 428..451 CDD:290200 5/22 (23%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..479 CDD:290200 6/24 (25%)
COG5048 <467..620 CDD:227381 36/136 (26%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 11/24 (46%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 3/16 (19%)
C2H2 Zn finger 598..615 CDD:275371
CG12391NP_610639.1 zf-AD 240..313 CDD:285071 20/129 (16%)
zf-C2H2 416..438 CDD:278523 8/21 (38%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-C2H2 443..465 CDD:278523 6/21 (29%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..491 CDD:275368 7/20 (35%)
C2H2 Zn finger 504..521 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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