DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG10631

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_609998.1 Gene:CG10631 / 35262 FlyBaseID:FBgn0032817 Length:3781 Species:Drosophila melanogaster


Alignment Length:408 Identity:91/408 - (22%)
Similarity:135/408 - (33%) Gaps:138/408 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 SFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEE---QHKSRGKPYACKICGKDFTR 359
            |:|:....:...|...|:||:|          ||.:|:...|   :.:|.|:           |.
  Fly   225 SYKSNYIDDNTPFADFSKFSEF----------SEDMLSPKVELTVKDESYGR-----------TT 268

  Fly   360 SYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCK-NCFY 423
            |..|:|.|:  |...||:..: |:.|..||:                  ||..|:.|..: ||  
  Fly   269 SSFLRRKQQ--SDRGNESLPI-CQRCKEVFF------------------KKQVYLRHVAESNC-- 310

  Fly   424 SLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHM 488
                         |.:.:|                          :.|:.|..:|...|.|.||.
  Fly   311 -------------GIQEYD--------------------------FKCSTCPMSFMTTEELQRHK 336

  Fly   489 KRHTGER--PHKCDECGKSFIQATQLRTHS--KTHIRPFPCEQCDEKFKTEKQLERHVKTHSRTK 549
            ..|..:|  .||  .|||.|....:...|.  :.....|.|..|...|.|.:||..|:..|...:
  Fly   337 LHHRADRFFCHK--YCGKHFDTIAECEAHEYMQHEYDSFVCNMCSGTFATREQLYAHLPQHKFQQ 399

  Fly   550 RPVFSCAECKRNFRTPALLKEHMDE-----GKHSPKQQRSSMRSAVKIMERTDCAICDKNFDSSD 609
            |  |.|..|:..::|...|.||...     ||:....|.||...:.....:|       |:...|
  Fly   400 R--FDCPICRLWYQTALELHEHRLAAPYFCGKYYTGGQSSSASQSQAQQHQT-------NYKLQD 455

  Fly   610 TLRRHIRTVHECDPDDIFGVEPHPSKRAKKDIESEEVVPVALNTSAGSLISSQTDGNGVVVREFL 674
            .   |:.|:.       ....||     .|...|...:|.   |:|.:.:..|...|        
  Fly   456 C---HMATME-------MPTTPH-----HKTTPSGSSLPA---TAALNSLLQQRQAN-------- 494

  Fly   675 VDEGDGAAQ--TITLENE 690
               .||||.  ...::||
  Fly   495 ---ADGAAMFAASAMKNE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 3/14 (21%)
COG5048 <312..517 CDD:227381 46/212 (22%)
C2H2 Zn finger 321..341 CDD:275368 4/22 (18%)
zf-C2H2 348..368 CDD:278523 4/19 (21%)
C2H2 Zn finger 350..368 CDD:275368 4/17 (24%)
C2H2 Zn finger 382..402 CDD:275368 4/19 (21%)
C2H2 Zn finger 415..435 CDD:275368 3/20 (15%)
zf-H2C2_2 428..451 CDD:290200 2/22 (9%)
C2H2 Zn finger 443..463 CDD:275368 0/19 (0%)
zf-H2C2_2 455..479 CDD:290200 2/23 (9%)
COG5048 <467..620 CDD:227381 43/161 (27%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
zf-H2C2_2 484..508 CDD:290200 11/25 (44%)
C2H2 Zn finger 499..519 CDD:275368 5/21 (24%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 5/16 (31%)
C2H2 Zn finger 598..615 CDD:275371 2/16 (13%)
CG10631NP_609998.1 C2H2 Zn finger 288..311 CDD:275368 10/55 (18%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
DM3 584..642 CDD:128933
DM3 683..738 CDD:128933
DM3 775..832 CDD:128933
DM3 945..1000 CDD:128933
DM3 1038..1096 CDD:128933
DM3 1145..1198 CDD:128933
THAP 1236..1308 CDD:214951
DM3 1349..1406 CDD:128933
THAP 1424..1493 CDD:214951
DM3 1538..1596 CDD:128933
DM3 1683..1739 CDD:128933
DM3 1778..1831 CDD:128933
DM3 1980..2033 CDD:128933
DM3 2147..2202 CDD:128933
DM3 2308..2365 CDD:128933
DM3 2434..2491 CDD:128933
DM3 2539..2598 CDD:128933
DM3 2622..2680 CDD:128933
DM3 2718..2775 CDD:128933
DM3 2907..2965 CDD:128933
DM3 3098..3155 CDD:128933
DM3 3227..3284 CDD:128933
DM3 3396..3452 CDD:128933
DM3 3544..3601 CDD:128933
THAP 3621..>3669 CDD:283206
DM3 3690..3748 CDD:128933
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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