DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG17568

DIOPT Version :10

Sequence 1:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:389 Identity:98/389 - (25%)
Similarity:150/389 - (38%) Gaps:69/389 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 ETTKIKTSPSKRKKMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEVVPGRIENNNGQ 181
            ||:..:...|||....|.:       .||.:..:.:..:|     ||     ::.|..:|.|..|
  Fly   148 ETSSQEMEISKRTTTTHLI-------QTKKNVEMEIPKQE-----FI-----DLGPILLEKNTSQ 195

  Fly   182 EIVVTED--DEDLGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRY 244
              :..||  ||...|:..:...||:....|.:..:|                    .:.|:.|..
  Fly   196 --LDMEDVLDELPQEELSQPRLDSTTSPASMENDVK--------------------SEMLDSCEG 238

  Fly   245 DSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYERHI 309
            |..: |.....|.:|..:......:|        |.:.:....|.::|..|.|.::.:.|||:|:
  Fly   239 DDDF-LPVDGQLMDLVAVATTPNTLE--------STAEEKAKRGRMDCEKCGKVYRNRASYEKHL 294

  Fly   310 --------FITHSEFSDFPCSICNANLRSEALLALHEEQHKSRGKPYACKICGKDFTRSYHLKRH 366
                    .....:.:...|.|||..|.|...|.||:|......|||.|..|||.......|..|
  Fly   295 ERECRRIERRVKVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEH 359

  Fly   367 QKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIH 431
            :...:    |:....|.||...|..    |:.||.|.  |:..:|.::|:.|.....:..|.|:|
  Fly   360 KLVHT----ESRPFECTVCKAGFKN----RARLKAHY--QIHAEPSFVCNICGKKLQTRRTWNMH 414

  Fly   432 IRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRH-MKRHTGE 494
            ...||.|:...||:|...|.....||.|...|||.:||.|..|.::||.......| :|:|..|
  Fly   415 KVVHTEERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKHPQE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 7/28 (25%)
COG5048 <312..517 CDD:227381 58/184 (32%)
C2H2 Zn finger 321..341 CDD:275368 10/19 (53%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
COG5048 <467..620 CDD:227381 10/29 (34%)
C2H2 Zn finger 471..491 CDD:275368 6/20 (30%)
C2H2 Zn finger 499..519 CDD:275368
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 54/167 (32%)
C2H2 Zn finger 314..335 CDD:275368 10/20 (50%)
C2H2 Zn finger 343..363 CDD:275368 6/19 (32%)
C2H2 Zn finger 371..391 CDD:275368 9/25 (36%)
C2H2 Zn finger 398..418 CDD:275368 5/19 (26%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
C2H2 Zn finger 454..475 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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