DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and Plzf

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster


Alignment Length:510 Identity:108/510 - (21%)
Similarity:185/510 - (36%) Gaps:120/510 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 KTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEK--------IEKDAVVMEKKDICFCCSESYD 283
            :|.:.:.:|.:.|         |.:.::.|.|..:        :|.|:.......:.||...:..
  Fly     5 QTMQSIPTLHQPL---------HSKVSNYLNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQS 60

  Fly   284 TFHLGHINCPDCPKSFKTQTSYERH--IFITHSEFSDFPCSICNANLRSEALLALHEEQHKSRGK 346
            .|    ||      |.:.|..:..|  :.||...||...|.....:...|.|:::.:| |:...:
  Fly    61 QF----IN------SNQKQQQFSIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSKE-HELHFR 114

  Fly   347 PYACKICGKDFTRSYHL--------------------------------KRHQKYSSCSSNETDT 379
            ..|..:...:....|.|                                :..|.|....:.....
  Fly   115 ELAQILAVTELLNLYQLQPLGEAKEATEIPAPGEAQPNPDPEKKAEAVFENRQSYFKLKNPRAVK 179

  Fly   380 MSCKV-----CDRVFYRLDNLRSHL----KQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTH 435
            .|.||     ||...|::..:..|:    ..||          :|..|:..|......:.|:|.|
  Fly   180 SSSKVNYCIGCDFKCYQVQKMIEHMGSCEPSHL----------ICSLCEVGFLDWREYDTHLRRH 234

  Fly   436 TGE--KPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHK 498
            :|:  |||.|..|..:|:...||..|:..|:.|.|:.|..|.:.|..|:.|:.|:..|..|:...
  Fly   235 SGDLRKPFFCLQCGIRFNTRAALLVHQPKHSTETPHICPHCGKGFKWKQGLSNHILVHNPEKQML 299

  Fly   499 CDECGKSFIQATQLRTHSKTHIRP-FPC--EQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKR 560
            ||.||.|......|::|...|... |.|  ..|..:...::.|:.|::||.:.:.  |.|..|..
  Fly   300 CDVCGYSTTHMKALKSHKLLHTGEFFACTVSGCKHRANRKENLKLHIETHKQGRD--FICEVCGC 362

  Fly   561 NFRTPALLKEH-MDEGKHSPKQQRSSMRSAVKIMERTDCAICDKNFDSSDTLRRHIRTVH----- 619
            .|.....||.| :...::.|              .|..|.:|..:...||.::.|::.||     
  Fly   363 KFSQSKNLKRHALKHTENGP--------------NRYKCQLCGFSSHRSDKMKEHVQRVHTEKPV 413

  Fly   620 ---------ECDPDD--IFGVEPHPSKRAKKDIESEEVVPVALNTSAGSLISSQT 663
                     ...|||  :..:|..|.|: .|.::|:.:..|..:....:|:..:|
  Fly   414 QLELSETVDSSFPDDFELPVIETSPKKK-PKSVKSKTIRNVNPDKRLKTLLPKET 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 4/22 (18%)
COG5048 <312..517 CDD:227381 56/247 (23%)
C2H2 Zn finger 321..341 CDD:275368 4/19 (21%)
zf-C2H2 348..368 CDD:278523 3/51 (6%)
C2H2 Zn finger 350..368 CDD:275368 2/49 (4%)
C2H2 Zn finger 382..402 CDD:275368 6/28 (21%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-H2C2_2 428..451 CDD:290200 9/24 (38%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..479 CDD:290200 8/23 (35%)
COG5048 <467..620 CDD:227381 40/170 (24%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 9/23 (39%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 4/21 (19%)
C2H2 Zn finger 555..572 CDD:275368 6/17 (35%)
C2H2 Zn finger 598..615 CDD:275371 4/16 (25%)
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 59/235 (25%)
C2H2 Zn finger 214..234 CDD:275368 5/19 (26%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..349 CDD:275368 3/18 (17%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 387..408 CDD:275368 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446721
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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