DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG11695

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster


Alignment Length:549 Identity:122/549 - (22%)
Similarity:188/549 - (34%) Gaps:175/549 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 KMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEV--VPGRIENNNGQEIVVT------ 186
            |||.:      ||:..|||...::.|.:..:....||:||.  :.|...:|:....:.|      
  Fly    82 KMEPF------SEDEDADTKAQILCEPEIDVSPAAADNEECNEIDGDASSNSRSSSIRTTSLREM 140

  Fly   187 -----------------------------------EDDEDLGEDGDEDGEDSSGKGNSSQTKIKE 216
                                               |.|||  ||.:.:|:..|...||.:.. ..
  Fly   141 RLPSPIRRRMRLPRAVTAPKTQAVKAKARTKTHKAEADED--EDAEGEGDPESRSSNSREMD-SY 202

  Fly   217 IVEH------VCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDIC 275
            |..|      :||. .:.|.....:|:|..      .:|.                         
  Fly   203 IALHGRLECCICGG-DEQFPNFAEMKRHFR------NHHQ------------------------- 235

  Fly   276 FCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEEQ 340
                      .||::.|  |.:.:|.:..|..|:.: |::.:.|.|.||:..|.|.    :..:.
  Fly   236 ----------SLGYVVC--CQRRYKKRALYVDHLHM-HNDPNYFRCKICSKQLVSR----ISYDV 283

  Fly   341 HKSRGKP------YACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHL 399
            |..|..|      :||..|.|.|::.:.|..|.:......||    .||.|||.|....:||.|:
  Fly   284 HMLRFHPNKDDLSFACDQCSKRFSKQFLLTIHSRVHQQERNE----QCKHCDRSFRTAVDLRLHM 344

  Fly   400 KQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTH-TGEKPFDCDLCDKKFSALVALKKHRR-- 461
            :                                ||| ....||.||.|..||.....|..|:|  
  Fly   345 R--------------------------------RTHDPAFVPFICDSCGAKFKTKQNLLVHKRTV 377

  Fly   462 YHTGEK--PYSCTVCNQAFAVKEVLNRHMKRH---TGERPHKCDECGKSFIQATQLRTHSKTHIR 521
            :..|.:  ...|..|....:.:..|.:||..|   ...|..||::||.......:|..|.:.| .
  Fly   378 HREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYH-H 441

  Fly   522 P---FPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNFRTPALLKEHMDEGKHSPKQQR 583
            |   ..|..|.::||:.:.||.|..||  |.:.::.||.|:|.|:....:.:|           |
  Fly   442 PKEYHKCTHCAKEFKSSRSLEEHTATH--TGQDLYECAFCERTFKNSGNMHKH-----------R 493

  Fly   584 SSMRSA-VKIMERTDCAICDKNFDSSDTL 611
            ..|.:| |..:::.......|..|..|.|
  Fly   494 RQMHAAQVAALQQQKKVPPSKRKDKGDLL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/20 (25%)
COG5048 <312..517 CDD:227381 55/218 (25%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
zf-C2H2 348..368 CDD:278523 7/19 (37%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
C2H2 Zn finger 415..435 CDD:275368 1/19 (5%)
zf-H2C2_2 428..451 CDD:290200 9/23 (39%)
C2H2 Zn finger 443..463 CDD:275368 8/21 (38%)
zf-H2C2_2 455..479 CDD:290200 6/27 (22%)
COG5048 <467..620 CDD:227381 39/154 (25%)
C2H2 Zn finger 471..491 CDD:275368 5/19 (26%)
zf-H2C2_2 484..508 CDD:290200 9/26 (35%)
C2H2 Zn finger 499..519 CDD:275368 5/19 (26%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 5/16 (31%)
C2H2 Zn finger 598..615 CDD:275371 4/14 (29%)
CG11695NP_572732.1 zf-AD 2..81 CDD:285071
C2H2 Zn finger 268..289 CDD:275368 7/24 (29%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..348 CDD:275368 10/52 (19%)
C2H2 Zn finger 357..376 CDD:275368 7/18 (39%)
C2H2 Zn finger 389..409 CDD:275368 5/19 (26%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
C2H2 Zn finger 448..468 CDD:275368 7/19 (37%)
C2H2 Zn finger 476..494 CDD:275368 6/28 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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