DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG11695

DIOPT Version :10

Sequence 1:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster


Alignment Length:549 Identity:122/549 - (22%)
Similarity:188/549 - (34%) Gaps:175/549 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 KMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEV--VPGRIENNNGQEIVVT------ 186
            |||.:      ||:..|||...::.|.:..:....||:||.  :.|...:|:....:.|      
  Fly    82 KMEPF------SEDEDADTKAQILCEPEIDVSPAAADNEECNEIDGDASSNSRSSSIRTTSLREM 140

  Fly   187 -----------------------------------EDDEDLGEDGDEDGEDSSGKGNSSQTKIKE 216
                                               |.|||  ||.:.:|:..|...||.:.. ..
  Fly   141 RLPSPIRRRMRLPRAVTAPKTQAVKAKARTKTHKAEADED--EDAEGEGDPESRSSNSREMD-SY 202

  Fly   217 IVEH------VCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDIC 275
            |..|      :||. .:.|.....:|:|..      .:|.                         
  Fly   203 IALHGRLECCICGG-DEQFPNFAEMKRHFR------NHHQ------------------------- 235

  Fly   276 FCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEEQ 340
                      .||::.|  |.:.:|.:..|..|:.: |::.:.|.|.||:..|.|.    :..:.
  Fly   236 ----------SLGYVVC--CQRRYKKRALYVDHLHM-HNDPNYFRCKICSKQLVSR----ISYDV 283

  Fly   341 HKSRGKP------YACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHL 399
            |..|..|      :||..|.|.|::.:.|..|.:......||    .||.|||.|....:||.|:
  Fly   284 HMLRFHPNKDDLSFACDQCSKRFSKQFLLTIHSRVHQQERNE----QCKHCDRSFRTAVDLRLHM 344

  Fly   400 KQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTH-TGEKPFDCDLCDKKFSALVALKKHRR-- 461
            :                                ||| ....||.||.|..||.....|..|:|  
  Fly   345 R--------------------------------RTHDPAFVPFICDSCGAKFKTKQNLLVHKRTV 377

  Fly   462 YHTGEK--PYSCTVCNQAFAVKEVLNRHMKRH---TGERPHKCDECGKSFIQATQLRTHSKTHIR 521
            :..|.:  ...|..|....:.:..|.:||..|   ...|..||::||.......:|..|.:.| .
  Fly   378 HREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYH-H 441

  Fly   522 P---FPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNFRTPALLKEHMDEGKHSPKQQR 583
            |   ..|..|.::||:.:.||.|..||  |.:.::.||.|:|.|:....:.:|           |
  Fly   442 PKEYHKCTHCAKEFKSSRSLEEHTATH--TGQDLYECAFCERTFKNSGNMHKH-----------R 493

  Fly   584 SSMRSA-VKIMERTDCAICDKNFDSSDTL 611
            ..|.:| |..:::.......|..|..|.|
  Fly   494 RQMHAAQVAALQQQKKVPPSKRKDKGDLL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 5/20 (25%)
COG5048 <312..517 CDD:227381 55/218 (25%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
C2H2 Zn finger 415..435 CDD:275368 1/19 (5%)
C2H2 Zn finger 443..463 CDD:275368 8/21 (38%)
COG5048 <467..620 CDD:227381 39/154 (25%)
C2H2 Zn finger 471..491 CDD:275368 5/19 (26%)
C2H2 Zn finger 499..519 CDD:275368 5/19 (26%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 5/16 (31%)
C2H2 Zn finger 598..615 CDD:275371 4/14 (29%)
CG11695NP_572732.1 zf-AD 2..81 CDD:462262
C2H2 Zn finger 268..289 CDD:275368 7/24 (29%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
SUF4-like 327..>387 CDD:411020 23/91 (25%)
C2H2 Zn finger 327..348 CDD:411020 10/52 (19%)
C2H2 Zn finger 327..348 CDD:275368 10/52 (19%)
C2H2 Zn finger 357..378 CDD:411020 8/20 (40%)
C2H2 Zn finger 357..376 CDD:275368 7/18 (39%)
C2H2 Zn finger 389..409 CDD:275368 5/19 (26%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
C2H2 Zn finger 448..468 CDD:275368 7/19 (37%)
C2H2 Zn finger 476..494 CDD:275368 6/28 (21%)
Blue background indicates that the domain is not in the aligned region.

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