DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG11696

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster


Alignment Length:562 Identity:125/562 - (22%)
Similarity:197/562 - (35%) Gaps:141/562 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKEGKEKKGKLLGVENISPPKDKRPATRMKLLNDVGAGEDSEASTTTTTSRTPSNKQEKRGSVAG 68
            |.||.:.|..:|    ..|..|...|         |..:||:...|......|.::.::      
  Fly   115 SYEGDDIKDHIL----CEPVIDALSA---------GDEKDSDYGDTFEPDFEPESQPDE------ 160

  Fly    69 SRIKILNEEILGTP-KTEKRGATKSTAPAASTVKILNEKKTPSATVTAVETTKIKTSPSKRKKME 132
                  .||....| |...||..:.|| ...|.:|:..|..........:.|::....|:.::.|
  Fly   161 ------EEEPEPDPVKPRPRGRPRKTA-LQQTHQIIKRKYEKRKQQNKAKITELSLRESRARQRE 218

  Fly   133 HYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEVVPGRIENNNGQEIVVTEDDEDLG---- 193
                  :|..:..|         |||..    .|::|                 ||:||:|    
  Fly   219 ------LKRSSAGA---------EDDQD----GDEDE-----------------EDEEDVGGELT 247

  Fly   194 EDGDE-------------------DGEDSSGKGNSSQTKIKEIVEHV-------CGKCYKTFRRV 232
            .|.||                   |..|.:.:....::.|||:.:::       |..|.......
  Fly   248 PDADEQPKPRGKRGRPKTKKLVTADDNDDTSEVPVKRSSIKEMDDYIAANVKLDCAICAAPLEDF 312

  Fly   233 QSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESYD--TFHLGHI----- 290
            ..||:|.                     ::|.|.....|     ||:..|.  |.::.|:     
  Fly   313 NDLKRHF---------------------RVEHDCTGYVK-----CCNNRYKKRTLYVDHLHCHKD 351

  Fly   291 ----NCPDCPKSFKTQTSYERHIFITHSEFSDF--PCSICNANLRSEALLALHEEQHKSRGKPYA 349
                :|..|.|:|..:.|...|:...||:..:.  .|:||.|....:.||.:|.:.||...:|..
  Fly   352 PQYFSCQSCRKNFLNRNSQVMHMLRFHSQQQELVHQCAICEARFAKKFLLTMHLKGHKGTERPEV 416

  Fly   350 CKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQ-HLGTQVVKKPEY 413
            |..|.|.|...:.|..|.|....:  :...:.|.:|...|....|...|.|. |....|.   |.
  Fly   417 CDTCSKTFRTKFELSAHVKRMHAA--DFTPIICDICGTHFRSKANFLIHKKALHPDGPVA---EV 476

  Fly   414 MCHTCKNCFYSLSTLNIHIRTH---TGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCN 475
            .|..|........:|..|:..|   .|:..:.|.||:.:.|:..||..|.|||...|.:.|::|:
  Fly   477 QCTLCGRWLRDERSLRKHLARHDDRDGDTKYRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSLCD 541

  Fly   476 QAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSK 517
            :.|.:...|..||..|||...::|..|.::|.....:..|.|
  Fly   542 KEFKLPRALAEHMATHTGIDLYQCQFCTRTFKSHANMHNHKK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 6/20 (30%)
COG5048 <312..517 CDD:227381 58/210 (28%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
zf-C2H2 348..368 CDD:278523 6/19 (32%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 6/20 (30%)
C2H2 Zn finger 415..435 CDD:275368 4/19 (21%)
zf-H2C2_2 428..451 CDD:290200 7/25 (28%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..479 CDD:290200 9/23 (39%)
COG5048 <467..620 CDD:227381 15/51 (29%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 9/23 (39%)
C2H2 Zn finger 499..519 CDD:275368 5/19 (26%)
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368 4/16 (25%)
C2H2 Zn finger 357..378 CDD:275368 6/20 (30%)
C2H2 Zn finger 388..408 CDD:275368 7/19 (37%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 447..465 CDD:275368 5/17 (29%)
C2H2 Zn finger 478..498 CDD:275368 4/19 (21%)
C2H2 Zn finger 509..529 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..583 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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