DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment su(Hw) and Zfp865

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:XP_017177788.1 Gene:Zfp865 / 319748 MGIID:2442656 Length:1120 Species:Mus musculus


Alignment Length:567 Identity:124/567 - (21%)
Similarity:189/567 - (33%) Gaps:187/567 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 LGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADML 256
            ||..|: .|....|.|..|:|       ..||.|.:.|.|.::||:|                  
Mouse   588 LGGAGN-GGAGGPGAGGPSKT-------FCCGICGRAFGRRETLKRH------------------ 626

  Fly   257 KNLEKIEKDAVVMEKKDICFCCSESY-DTFHLG--HI--------NCPDCPKSFKTQTSYERHIF 310
               |:|...    ||...|..|.:.: ::|||.  |:        .|..|.|.|....|..||..
Mouse   627 ---ERIHTG----EKPHQCPVCGKRFRESFHLSKHHVVHTRERPYKCELCGKVFGYPQSLTRHRQ 684

  Fly   311 ITHSEFS---------------------------------DFPCSICNANLRSEALLALHEEQHK 342
            :...:..                                 .:.||.|..:......:..|:|.|.
Mouse   685 VHRLQLPCALAGATGLATGQGTTGACGPGAAGTSGGPADLSYACSDCGEHFPDLFHVMSHKEAHM 749

  Fly   343 SRGKPYACKICGKDF----TRSYHLKRHQ--------------------------KYSSC----- 372
            |. |||.|..|||.|    ...:|...||                          ..||.     
Mouse   750 SE-KPYGCDACGKTFGFIENLMWHKLVHQAAPERLLAPTPSGPQSSDGGSSGGGTDASSVLDNGL 813

  Fly   373 --------------------------------SSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGT 405
                                            :|:..:..||..|.:.|.....|.:|...||..
Mouse   814 AGEVGTAVAALAGVSGGSEDAGGATVAGSGGGTSSGAERFSCATCGQSFKHFLGLVTHKYVHLVR 878

  Fly   406 QVV-----------------------KKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCD 447
            :.:                       :|..:.|..|...|:..:.|..|.|.||.::|:.|.:|.
Mouse   879 RTLGCGLCGQSFAGAYDLLLHRRSHRQKRGFRCPVCGKRFWEAALLMRHQRCHTEQRPYRCGVCG 943

  Fly   448 KKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQL 512
            :.|.....|::||..||||:.:.|.||.:.||....|..|.:.|...||.:|..|||:|...:.|
Mouse   944 RGFLRSWYLRQHRVVHTGERAFKCGVCAKHFAQSSSLAEHRRLHAVARPQRCGACGKTFRYRSNL 1008

  Fly   513 RTHSKTHI--RPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNFRTPALLKEHMDEG 575
            ..|.:.|:  |.:.||.|.:.|.....:.||.:.| ...||...|..|.:.|:.|...::|:   
Mouse  1009 LEHQRLHLGERAYRCEHCGKGFFYLSSVLRHQRAH-EPPRPELRCPACLKAFKDPGYFRKHL--- 1069

  Fly   576 KHSPKQQRSSMRSAVKIMERTDCAICDKNFDSSDTLRRHIRTVHECD 622
              :..|.....|          |:.|.:.|.::..|::| |.:|:.:
Mouse  1070 --AAHQGGRPFR----------CSSCGEGFANTYGLKKH-RLMHKAE 1103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 7/20 (35%)
COG5048 <312..517 CDD:227381 66/327 (20%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
zf-C2H2 348..368 CDD:278523 9/49 (18%)
C2H2 Zn finger 350..368 CDD:275368 8/47 (17%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-H2C2_2 428..451 CDD:290200 8/22 (36%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..479 CDD:290200 10/23 (43%)
COG5048 <467..620 CDD:227381 41/154 (27%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
zf-H2C2_2 484..508 CDD:290200 10/23 (43%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..572 CDD:275368 4/16 (25%)
C2H2 Zn finger 598..615 CDD:275371 4/16 (25%)
Zfp865XP_017177788.1 PHA03378 <225..>411 CDD:223065
C2H2 Zn finger 284..304 CDD:275368
C2H2 Zn finger 312..332 CDD:275368
PHA03247 <334..405 CDD:223021
COG5048 411..>483 CDD:227381
C2H2 Zn finger 414..434 CDD:275368
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 471..491 CDD:275368
C2H2 Zn finger 503..523 CDD:275370
C2H2 Zn finger 610..630 CDD:275368 9/40 (23%)
zf-H2C2_2 623..646 CDD:372612 9/47 (19%)
C2H2 Zn finger 638..658 CDD:275368 6/19 (32%)
C2H2 Zn finger 666..686 CDD:275368 7/19 (37%)
C2H2 Zn finger 728..748 CDD:275368 5/19 (26%)
C2H2 Zn finger 756..776 CDD:275368 6/19 (32%)
C2H2 Zn finger 855..875 CDD:275368 5/19 (26%)
C2H2 Zn finger 883..903 CDD:275368 0/19 (0%)
C2H2 Zn finger 911..931 CDD:275368 6/19 (32%)
zf-H2C2_2 924..948 CDD:372612 9/23 (39%)
C2H2 Zn finger 939..959 CDD:275368 6/19 (32%)
C2H2 Zn finger 967..987 CDD:275368 7/19 (37%)
C2H2 Zn finger 995..1015 CDD:275368 7/19 (37%)
C2H2 Zn finger 1023..1043 CDD:275368 6/19 (32%)
C2H2 Zn finger 1052..1072 CDD:275368 5/24 (21%)
C2H2 Zn finger 1080..1100 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.