DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG2129

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster


Alignment Length:462 Identity:106/462 - (22%)
Similarity:187/462 - (40%) Gaps:97/462 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 TKSTAPAASTVKILNEKKTPSATVTAVETTKIKTSPSKRKKMEHYVLQAVKSENTKADTTVTVVT 154
            |::|...|:..:..:.::.|::.|..|            .::..:....:..::.:......||.
  Fly    62 TEATDAGANLKQERDREREPNSPVPIV------------AQVNPFAWYEIGGDHNEDSDDERVVL 114

  Fly   155 EEDDTIDFILADDEEVVPGR---------------IENNNGQEIVVTEDDEDLGEDGDEDGEDSS 204
            |:.|       :||:..|||               :......::...|:|.:..|.|.|...||.
  Fly   115 EKQD-------EDEDERPGRSIIKWQDHQSLTSESLRQVRALKVDYKEEDSEQEECGMELDLDSE 172

  Fly   205 GKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHL----------EFCRYDSGYHLRKADMLKNL 259
            |:.::.       :.|.|..|.|.::..:.|::|:          :....|:.|           
  Fly   173 GRHSAK-------IPHSCPHCTKVYQSRKVLERHIMRQHKDTLSPDVDSEDADY----------- 219

  Fly   260 EKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSD-----F 319
             :..|||.|..       .::.|        .|..|.|.:..:.|..:|:...|....:     |
  Fly   220 -EPPKDAPVKS-------AAQEY--------KCEHCGKIYHGKYSLRQHLKRDHDNGEEGGSAIF 268

  Fly   320 PCSICNANLRSEALLALHEEQHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSC-- 382
            .|..|.|.|....||..|..|.....   ||.:||:.:...:.|||||...:...|    :.|  
  Fly   269 TCLECEAQLPRLRLLDEHMVQAHGGA---ACVVCGRRYKTRHELKRHQLKHTSERN----VPCPH 326

  Fly   383 KVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCD 447
            ..|.:.|:.:.::|:|.|.|     .::..::|.:|.....:..||.:|||:||||:||.|.:||
  Fly   327 PGCGKRFFTIRHMRNHGKVH-----TEQKNFVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCD 386

  Fly   448 KKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQL 512
            |:|.:...|::|...|:.|:|:.|:||...|:.::.|..|...|...:...|..||.::.||..|
  Fly   387 KRFPSHSGLREHMAMHSTERPHVCSVCGATFSRQKGLYHHKFLHADTKQFVCKLCGNAYAQAAGL 451

  Fly   513 RTHSKTH 519
            ..|.:.|
  Fly   452 AGHMRKH 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/20 (25%)
COG5048 <312..517 CDD:227381 64/211 (30%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
zf-C2H2 348..368 CDD:278523 8/19 (42%)
C2H2 Zn finger 350..368 CDD:275368 7/17 (41%)
C2H2 Zn finger 382..402 CDD:275368 6/21 (29%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-H2C2_2 428..451 CDD:290200 14/22 (64%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..479 CDD:290200 8/23 (35%)
COG5048 <467..620 CDD:227381 16/53 (30%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 6/23 (26%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
CG2129NP_572449.1 C2H2 Zn finger 296..316 CDD:275370 8/19 (42%)
zf-C2H2_8 323..411 CDD:292531 30/92 (33%)
C2H2 Zn finger 327..346 CDD:275368 5/18 (28%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 367..389 CDD:290200 14/21 (67%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
zf-H2C2_2 395..419 CDD:290200 9/23 (39%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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