DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and CG2116

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:698 Identity:137/698 - (19%)
Similarity:243/698 - (34%) Gaps:191/698 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 DDTIDFILADDEEVVPGRIENNNGQ-EIVVTEDD------EDLGEDGDED----GEDSSGKGNSS 210
            ::.|:|:|..:.:...   |:|.|. .::.|.||      ::||.:.:||    .|:...|   .
  Fly     9 NEVIEFVLPANSDYSD---EDNRGNVRVINTSDDATYVLLDNLGNEFEEDIIIVNENGVEK---E 67

  Fly   211 QTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDIC 275
            ....||:.:.:.|.      ||:.|....:..:    :.:|:.||.:..:.:|.:..:.::.|  
  Fly    68 MLMSKELRDFIVGS------RVKDLTDDEQMPQ----FVVRELDMSEVGDLVEVEPEMEQEAD-- 120

  Fly   276 FCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEE- 339
                                   :.....||......|.          ..|.|.|..|.::.. 
  Fly   121 -----------------------YGDYGDYEHEPSYGHP----------RDNERVEEDLDMYPPS 152

  Fly   340 ----------------QHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCSSNETDTMSCKVCDRV 388
                            |..|:.:..|.:|..:.|.            |..:|:.|..|.|.....
  Fly   153 SPSLPPSPPRPPSPVVQPASKARNSARQIALRSFV------------SQKNNDDDDGSVKEVKPS 205

  Fly   389 FYRLDNLRSHLKQHLGTQVV------------------------KKPEYMCHTCKNCFYSLSTLN 429
            ...|:..:...:..|...::                        :|....|..|.:..:. |.|:
  Fly   206 EKMLEEFKGPRRYMLFDDLIATIVDFDEDSTPLVEFSMISDIMDEKLPVECGICPDVMHK-SKLS 269

  Fly   430 IHIRTH--TGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHT 492
            .|.:||  .|...:.|..|.:.:.....|..|.|.|.|.:||.|.:|...|:.|:.|..|.:|..
  Fly   270 KHHKTHLVPGTNRYACIYCTETYRDCKYLAGHARRHMGIRPYVCELCTLYFSTKQDLRVHNQRRH 334

  Fly   493 GERPHKCDECGKSFIQATQLRTHSK-TH--IRPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVFS 554
            .|:.|.|:.|||:|.|.|||:.|.: ||  .|.|.||.|.:.:.....|:.|::.....||.:..
  Fly   335 LEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQCEYCQKAYYKNFSLQEHIRNVHMGKRRMLK 399

  Fly   555 CAECKRNFRTPALLKEHMDEGKHSPKQQRSSMRSAVKIMERTDCAICDKNFDSSDTLRRHIRTVH 619
            |..|....|....:..|.       |:...|..:.|       |.:|.:.|........|.|:: 
  Fly   400 CPFCGMQCRDAHKMARHR-------KEMHLSQGTYV-------CHLCQEEFTDISYFDAHKRSI- 449

  Fly   620 ECDPDDIFGVEPHPSKRAKKDIESEEVVPVALNTSAGSLISSQT---DGNGVVVREFLVDEGDGA 681
            :|..:....|....::...   :||.:        :|..::.|.   ||.|.:..|:  ||.|| 
  Fly   450 QCRSNTRRFVNADGNREGS---DSESI--------SGRNMNGQDDDYDGMGPLQEEY--DEDDG- 500

  Fly   682 AQTITLENETYTILPLDGAIEGEQLTDEAGVKPEAKKEEAQVSPVVKKEQRKSLAASLAAAI--A 744
              .:..:|:...    .|:....|..||:         |.|...:...:.:..|..:...|.  .
  Fly   501 --LLVEDNQPEE----QGSPSNRQYLDES---------EQQYVQLSDYDDQHLLVENAVDAEDGG 550

  Fly   745 DNLEESCSED---------------------DFSGEILTEEDIKLKEN 771
            ::|:|..:||                     |::.|::.|..:|.::|
  Fly   551 EDLDELLTEDQYFNAVQQHHQQHQQHHGRGQDYNDELIYEITLKTEDN 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 2/20 (10%)
COG5048 <312..517 CDD:227381 54/247 (22%)
C2H2 Zn finger 321..341 CDD:275368 4/36 (11%)
zf-C2H2 348..368 CDD:278523 3/19 (16%)
C2H2 Zn finger 350..368 CDD:275368 2/17 (12%)
C2H2 Zn finger 382..402 CDD:275368 2/19 (11%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-H2C2_2 428..451 CDD:290200 7/24 (29%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
zf-H2C2_2 455..479 CDD:290200 9/23 (39%)
COG5048 <467..620 CDD:227381 44/155 (28%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 10/23 (43%)
C2H2 Zn finger 499..519 CDD:275368 10/20 (50%)
C2H2 Zn finger 525..545 CDD:275368 5/19 (26%)
C2H2 Zn finger 555..572 CDD:275368 3/16 (19%)
C2H2 Zn finger 598..615 CDD:275371 3/16 (19%)
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 5/19 (26%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 20/48 (42%)
C2H2 Zn finger 313..334 CDD:275368 7/20 (35%)
C2H2 Zn finger 341..362 CDD:275368 10/20 (50%)
C2H2 Zn finger 370..388 CDD:275368 5/17 (29%)
C2H2 Zn finger 400..418 CDD:275370 4/24 (17%)
C2H2 Zn finger 429..447 CDD:275368 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446716
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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