DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(Hw) and Zfp212

DIOPT Version :9

Sequence 1:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_663551.2 Gene:Zfp212 / 232784 MGIID:2682609 Length:492 Species:Mus musculus


Alignment Length:526 Identity:114/526 - (21%)
Similarity:172/526 - (32%) Gaps:139/526 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TPKTEKRGATKSTAPAASTVKILNEKKTPSATVTAVET-TKIKTSPSKRKKMEHYVLQAVKSENT 144
            || |..|...::|..|.:|......:|:|....|.:.. |.:....:..||||....:....|..
Mouse     5 TP-TRHRRKRRATPLAPATPPSQTTEKSPYFQTTEISLWTVVAAIQAVEKKMESQAARLQSLEGR 68

  Fly   145 KADTTVTVVTEEDDTIDF------------ILADDEEVVPGRIEN------------------NN 179
            .......:...|...::|            .|..:..::..|:||                  :.
Mouse    69 AGSAEKKLADFEKTAVEFSNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNKNFWVLRLPPGSK 133

  Fly   180 GQEIVVTEDDEDLG----EDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLE 240
            |:...|:...|:.|    |...|:.||..          ||:..:|....|:|...::.|.:..|
Mouse   134 GETPKVSGSLENDGVCFSEQEWENLEDWQ----------KELYRNVMESNYETLVSLKVLGQPEE 188

  Fly   241 FCR---------YDSGYHLRKADMLK-----------NLEKIEKDAVVME----KKDICFCCS-- 279
            ...         .:.|.||....|:|           .|..:...||..:    .:...|..|  
Mouse   189 EVELGAEMVGDLVEEGTHLADRAMVKQEMLYKQEGPAGLPNMFSSAVEQQAFFGAEQAMFWNSPG 253

  Fly   280 --------------ESYDTFHLGHINCP----DCPKSFKTQTSYERHIFITHSEFSDFPCSICNA 326
                          ||.:|   .....|    |||:..|:    .|.:.:...         |..
Mouse   254 DSALLESGPGDSNPESVET---SRDPAPGRNLDCPRKQKS----HRQVQLGQE---------CGQ 302

  Fly   327 NLRSEALLALHEEQHKSRGKPYACKICGKDF----TRSYHLKRHQKYSSCSSNETDTMSCKVCDR 387
            .|:.           |....||.|..|...|    ..:.||:.|....|.|:.|.:         
Mouse   303 GLKV-----------KRDSSPYKCPECQISFRYKQQLTAHLQSHAGRESYSATEPE--------- 347

  Fly   388 VFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFS- 451
                 ::||.  :..|..|..:...:.|..|...|....:|..|.|.|..|.|.......::|| 
Mouse   348 -----ESLRP--RPRLKPQAKRSKLHQCDVCHRSFSCKVSLVTHQRCHQQEGPSTSPQIQERFSP 405

  Fly   452 -ALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTH 515
             :||||..|..:........|..|.::|:....|.||.:.||||||:.|.||.|||:|...|..|
Mouse   406 NSLVALPGHIPWRKSRSSLICGYCGKSFSHPSDLVRHQRIHTGERPYSCPECEKSFVQKQHLLQH 470

  Fly   516 SKTHIR 521
            .|.|.|
Mouse   471 QKIHQR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 6/24 (25%)
COG5048 <312..517 CDD:227381 55/210 (26%)
C2H2 Zn finger 321..341 CDD:275368 2/19 (11%)
zf-C2H2 348..368 CDD:278523 7/23 (30%)
C2H2 Zn finger 350..368 CDD:275368 6/21 (29%)
C2H2 Zn finger 382..402 CDD:275368 2/19 (11%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-H2C2_2 428..451 CDD:290200 6/22 (27%)
C2H2 Zn finger 443..463 CDD:275368 7/21 (33%)
zf-H2C2_2 455..479 CDD:290200 5/23 (22%)
COG5048 <467..620 CDD:227381 24/55 (44%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 15/23 (65%)
C2H2 Zn finger 499..519 CDD:275368 10/19 (53%)
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Zfp212NP_663551.2 KRAB_A-box 142..180 CDD:143639 11/47 (23%)
zf-C2H2 313..335 CDD:278523 6/21 (29%)
C2H2 Zn finger 315..335 CDD:275368 5/19 (26%)
COG5048 <358..>474 CDD:227381 39/115 (34%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
zf-C2H2 426..446 CDD:278523 6/19 (32%)
zf-H2C2_2 438..463 CDD:290200 15/24 (63%)
C2H2 Zn finger 454..474 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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