Protein Alignment red and Lysmd2

DIOPT Version :10

• Sequence 1: NP_650352.1
• Gene: red / 41738
• FlyBaseID: FBgn0285913
• Length: 366
• Species: Drosophila melanogaster
• Sequence 2: XP_006243468.1
• Gene: Lysmd2 / 300839
• RGDID: 1304585
• Length: 282
• Species: Rattus norvegicus
• Alignment Length: 143
• Identity: 37/143 - (25%)
• Similarity: 49/143 - (34%)
• Gaps: 60/143 - (41%)

  Fly    42 RTLKR-YGSTCCNSLRNN------ETLIRHIVEKTDTLQGIALKYGCTTEQIRRANRLFASDSLF 99
            ||..| ||||.  |:|..      |..:.|.|...|||||||||||.|           .:.||:
  Rat   179 RTKTRSYGSTA--SVRAPLGAGVIERHVEHRVRAGDTLQGIALKYGVT-----------GNWSLY 230

  Fly   100 LRQFLLVPVEKNSPYYPQVPGDSIAAFDAVLATPPGTPDANGQREAHNNANNLSQSNKSFMKSND 164
            ....|:     ..|:...:|..::                                   ..::|.
  Rat   231 CNLELI-----QGPFLDTMPMINL-----------------------------------IWRNNK 255

  Fly   165 ISSSSSSSSSGSS 177
            ||...:.|.||||
  Rat   256 ISEMKNGSFSGSS 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
red	NP_650352.1	LysM	<62..108	CDD:440998	17/45 (38%)
Lysmd2	XP_006243468.1	LysM	<139..224	CDD:440998	23/46 (50%)