Protein Alignment red and lmd-2

DIOPT Version :10

• Sequence 1: NP_650352.1
• Gene: red / 41738
• FlyBaseID: FBgn0285913
• Length: 366
• Species: Drosophila melanogaster
• Sequence 2: NP_491415.2
• Gene: lmd-2 / 172073
• WormBaseID: WBGene00015008
• Length: 159
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 41/156 - (26%)
• Similarity: 73/156 - (46%)
• Gaps: 30/156 - (19%)

  Fly    25 DDSEFM--FNEKQSIRDSGRTLKRYGST---------CCNSLRNNETLIRHIVEKTDTLQGIALK 78
            |:|.|:  ||.          ::|||:|         |..::        :.|:..|||:.||||
 Worm    19 DESTFLVGFNR----------VRRYGTTQSQSSPVTPCSYTI--------YQVQTDDTLERIALK 65

  Fly    79 YGCTTEQIRRANRLFASDSLFLRQFLLVPVEKNSPYYPQVPGDSIAAFDAVLATPPGTPDANGQR 143
            :.|:...:.|||:|::..:||::||:.:|: .||......|.........|.||......:..::
 Worm    66 HNCSVSSLVRANKLWSPSALFMKQFIRIPI-FNSQQPNLKPSLQETQCKIVPATTERVDSSREEK 129

  Fly   144 EAHNNANNLSQSNKSFMKSNDISSSS 169
            ...:....:.::.|||.|.::.|||:
 Worm   130 SMKDILQRIDRNIKSFRKCDNPSSSA 155

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
red	NP_650352.1	LysM	<62..108	CDD:440998	17/45 (38%)
lmd-2	NP_491415.2	LysM	<33..94	CDD:440998	21/68 (31%)