DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and SET1

DIOPT Version :9

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_011987.1 Gene:SET1 / 856519 SGDID:S000001161 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:1188 Identity:244/1188 - (20%)
Similarity:411/1188 - (34%) Gaps:379/1188 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  2700 VQNTVMSSQQFVSTAMPGMLSQNASFSATTTQVFQASKIEPIVDLPAGYVVLNNTGDASS----- 2759
            |.||:.||...:.|....:|.|..                     |:  |:..||.:..|     
Yeast   111 VHNTLASSSGSLPTESALLLQQRP---------------------PS--VLRYNTDNLKSKFHYF 152

  Fly  2760 ---AGTFLNAASVLQQQTQDDTTTQI-------LQNANFQFQSVPTSSGASTSMDYTSPVMVTAK 2814
               .|.|.|...:|..:..|...::.       ||:..|:|                        
Yeast   153 DPIKGEFFNKDKMLSWKATDKEFSETGYYVVKELQDGQFKF------------------------ 193

  Fly  2815 IPPVTQIKRTNAQAKAA------GISGVGKV-------------------------PPQPQVVNK 2848
                 :||..:.:.||:      ||...|||                         ||..::|..
Yeast   194 -----KIKHRHPEIKASDPRNENGIMTSGKVATHRKCRNSLILLPRISYDRYSLGPPPSCEIVVY 253

  Fly  2849 VLPTSIVTQQSQVQVKNSNLKQSQVKG------------------KAASGTGTTCGAPPSIASKP 2895
            ....|..|....:.:||...|..::..                  |.||..|....|..:..|..
Yeast   254 PAQDSTTTNIQDISIKNYFKKYGEISHFEAFNDPNSALPLHVYLIKYASSDGKINDAAKAAFSAV 318

  Fly  2896 ------------------LQKKTNMIRPIHK-LEVKPKVMKPTPKVQNQNHSLLQQQQQQQPQLQ 2941
                              |.|.:.:...|.| :|:..|.::   |:|.......:::.:.:...:
Yeast   319 RKHESSGCFIMGFKFEVILNKHSILNNIISKFVEINVKKLQ---KLQENLKKAKEKEAENEKAKE 380

  Fly  2942 QQIPAVVVNQVPKV-TISQQRIPAQTQQQQLQQAQMIHIPQQQQPLQQQQVQVQPSMPIITLAEA 3005
            .|...:.:.:.||| |:|                   |....::.:....:.|..:.|::.:::.
Yeast   381 LQGKDITLPKEPKVDTLS-------------------HSSGSEKRIPYDLLGVVNNRPVLHVSKI 426

  Fly  3006 PVVQSQFVME-----------------PQALEQQELANRVQHFSTSSSSSSSNCSLPTN------ 3047
            .|.:.:|.:|                 |..:  ..:.|.:.|..|.|::.|.|.::.:.      
Yeast   427 FVAKHRFCVEDFKYKLRGYRCAKFIDHPTGI--YIIFNDIAHAQTCSNAESGNLTIMSRSRRIPI 489

  Fly  3048 ------VVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVSSPTP------PKPVE 3100
                  ::...|.:.....|||::..||..:..:.::|         .:.:...      .|.:.
Yeast   490 LIKFHLILPRFQNRTRFNKSSSSSNSTNVPIKYESKEE---------FIEATAKQILKDLEKTLH 545

  Fly  3101 QPIIHQMTSASVSKCYAQKSTLPSPVYEAELKVSSVLESIVPDVTMDAILEEQPVTESIYTEGLY 3165
            ..|..::...:|... ...:..|..:.:.|||.....:.|...:..|.:..::.........|||
Yeast   546 VDIKKRLIGPTVFDA-LDHANFPELLAKRELKEKEKRQQIASKIAEDELKRKEEAKRDFDLFGLY 609

  Fly  3166 ----EKNSPGESKTEQLLLQQQ--QREQLNQQLVNNGYLLDKHTFQVEPMDTDVYREEDL---EE 3221
                :.|.....:...|.|...  :|::|:..:....:||::.|   :..:|....:|.:   .:
Yeast   610 GGYAKSNKRNLKRHNSLALDHTSLKRKKLSNGIKPMAHLLNEET---DSKETTPLNDEGITRVSK 671

  Fly  3222 EEDEDDDFSLKMATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCADSIATATTMEVDASAGYQ 3286
            |.||:|:   .|.:|:      |:.||....||..|            |.:..||.|.|...|.:
Yeast   672 EHDEEDE---NMTSSS------SEEEEEEAPDKKFK------------SESEPTTPESDHLHGIK 715

  Fly  3287 QMVEDVLATTAAQSAPTEEFEGALETAAVEAAATYINE-MADAHVLDLKQLQNGVELELR---RR 3347
            .:|.|       |:..::..:.   ::..:..||.|.| :......|||..|....::|:   :.
Yeast   716 PLVPD-------QNGSSDVLDA---SSMYKPTATEIPEPVYPPEEYDLKYSQTLSSMDLQNAIKD 770

  Fly  3348 KEEQRTVSQEQEQSKAAIVP-TAAAPE-----PPQPIQEPKKMTGPHL-----LYEIQSEDGFTY 3401
            :|:...:.|........:.| |:||.|     ..:.:.|.:|.:...:     |::.:.:.|.::
Yeast   771 EEDMLILKQLLSTYTPTVTPETSAALEYKIWQSRRKVLEEEKASDWQIELNGTLFDSELQPGSSF 835

  Fly  3402 KSSSITEIWEKVFEAVQVARRAHGLTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKY 3466
            |:....:|.:|                                ||.|                 |
Yeast   836 KAEGFRKIADK--------------------------------LKIN-----------------Y 851

  Fly  3467 TPKYHKRNGNVSTAANGAHGGNLGGSSASAALSVSGGDSHGLLDYGSDQDELEENAYDCARC--E 3529
            .|  |:|..:........|.                                |.|.|....|  |
Yeast   852 LP--HRRRVHQPLNTVNIHN--------------------------------ERNEYTPELCQRE 882

  Fly  3530 PYSNRSEYDMFSWLASRHRKQPIQVFVQPSDNELVPRR------------GTGSNLPMAMKYRTL 3582
            ..||:...|......|..|           ||....||            ||.|.|   :....|
Yeast   883 ESSNKEPSDSVPQEVSSSR-----------DNRASNRRFQQDIEAQKAAIGTESEL---LSLNQL 933

  Fly  3583 KETYKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIG-CYMFKI 3646
            .:..|. |...||.||..|||....|.|.||:|||.||.||..:.:.||:.|...||| .|:|::
Yeast   934 NKRKKP-VMFARSAIHNWGLYALDSIAAKEMIIEYVGERIRQPVAEMREKRYLKNGIGSSYLFRV 997

  Fly  3647 DDNLVVDATMRGNAARFINHCCEPNCYSKVVDILGHKHIIIFALRRIVQGEELTYDYKFPFE--- 3708
            |:|.|:|||.:|..||||||||:|||.:|::.:.|.:.|:|:|||.|...|||||||||..|   
Yeast   998 DENTVIDATKKGGIARFINHCCDPNCTAKIIKVGGRRRIVIYALRDIAASEELTYDYKFEREKDD 1062

  Fly  3709 DEKIPCSCGSKRCRKYLN 3726
            :|::||.||:..|:.:||
Yeast  1063 EERLPCLCGAPNCKGFLN 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:295381
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1891..1935 CDD:283589
FYRC 3388..3476 CDD:197781 12/92 (13%)
SET 3590..3710 CDD:214614 63/123 (51%)
SET1NP_011987.1 RRM_scSet1p_like 246..360 CDD:409743 19/116 (16%)
SET_assoc 422..486 CDD:403081 10/65 (15%)
SET 612..1080 CDD:225491 151/599 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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